RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 EFNB1P98172 346 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TFF3Q07654 80 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 POU4F2Q12837 409 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 MAP4K2Q12851 820 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TPBGQ13641 420 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TRAM1Q15629 374 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 PRICKLE4Q2TBC4 344 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TMPRSS11AQ6ZMR5 421 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 FGD2Q7Z6J4 655 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 KIF18BQ86Y91 864 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 DOLPP1Q86YN1 238 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 NRMQ8IXM6 262 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 ARHGEF39Q8N4T4 335 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 OR51Q1Q8NH59 317 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 GPR151Q8TDV0 419 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 THAP3Q8WTV1 239 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CTHRC1Q96CG8 243 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 MRPL48Q96GC5 212 aaKnown RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 KCTD7Q96MP8 289 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 SLC30A2Q9BRI3 323 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CENPOQ9BU64 300 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 G6PC3Q9BUM1 346 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 ASPNQ9BXN1 380 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 RBCK1Q9BYM8 510 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TRIM2Q9C040 744 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 QRSL1Q9H0R6 528 aaKnown RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TAS2R16Q9NYV7 291 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CNIH4Q9P003 139 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 ADAM30Q9UKF2 790 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 SLC7A7Q9UM01 511 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TRAPPC4Q9Y296 219 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 KCNE3Q9Y6H6 103 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 IGHV1-45A0A0A0MS14 117 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 SLC22A31A6NKX4 558 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 RIIAD1A6NNX1 92 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 NPIPA5E9PKD4 350 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 DYRK3O43781 588 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 IGHA1P01876 353 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 CD53P19397 219 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 FGF9P31371 208 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-216ENST00000554975 MAP3K8P41279 467 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 SLC9A3P48764 834 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 GPR143P51810 404 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF136P52737 540 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 CTBP2P56545 445 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 IGLV3-21P80748 117 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-216ENST00000554975 SERTAD2Q14140 314 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 GPR68Q15743 365 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF766Q5HY98 468 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 ACSM5Q6NUN0 579 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 ARHGAP11AQ6P4F7 1023 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 NDUFAF7Q7L592 441 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 PHC2Q8IXK0 858 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 OR8D4Q8NGM9 314 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 CA5BP1Q8WTZ4 195 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 TMEM239Q8WW34 195 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 PEX11GQ96HA9 241 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 PLA2G12AQ9BZM1 189 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 TGIF2Q9GZN2 237 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 RNF32Q9H0A6 362 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 KCNN2Q9H2S1 579 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 EGLN3Q9H6Z9 239 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 Q9N2J8 555 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 CTPS2Q9NRF8 586 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 PRODH2Q9UF12 536 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 NPIPA1Q9UND3 350 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 SPIN1Q9Y657 262 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-216ENST00000554975 MPDZO75970 2070 aa10.09□□□□□ -0.79
SHMT2-216ENST00000554975 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 A0A1W2PS29 197 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 OR2W5A6NFC9 320 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 MAGEB3O15480 346 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 FRS3O43559 492 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 GPX5O75715 221 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 CDC123O75794 336 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 HLA-DPB1P04440 258 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF3P17036 446 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 SLC6A6P31641 620 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 PTGER1P34995 402 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 SLC1A3P43003 542 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 GPR4P46093 362 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 STX4Q12846 297 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 GPR50Q13585 617 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 PCOLCEQ15113 449 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 FLYWCH1Q4VC44 716 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 DDI2Q5TDH0 399 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 LCN1P1Q5VSP4 162 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 AADACL4Q5VUY2 407 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 HSDL2Q6YN16 418 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 QSOX2Q6ZRP7 698 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 TMPRSS11FQ6ZWK6 438 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 CXXC5Q7LFL8 322 aaKnown RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 CCDC190Q86UF4 302 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 LYSMD2Q8IV50 215 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 SIAH3Q8IW03 269 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 GPALPP1Q8IXQ4 340 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 CLIP4Q8N3C7 705 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 LNX2Q8N448 690 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms