RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PVRP15151 417 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ANXA13P27216 316 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GNA11P29992 359 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CD86P42081 329 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TUFMP49411 452 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 IST1P53990 364 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MTTPP55157 894 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ERVPABLB-1P60509 514 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PPIAP62937 165 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HTD2P86397 168 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TFAMQ00059 246 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZP4Q12836 540 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PDZK1IP1Q13113 114 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RFTN1Q14699 578 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZIC1Q15915 447 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF239Q16600 458 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ADPRMQ3LIE5 342 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 DCAF4L1Q3SXM0 396 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TTC31Q49AM3 519 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SLC22A6Q4U2R8 563 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TMEM215Q68D42 235 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 DMKNQ6E0U4 476 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SPINK14Q6IE38 97 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PNCKQ6P2M8 343 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 LEG1Q6P5S2 330 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCBE1Q6UXH8 406 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF562Q6V9R5 426 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 EFL1Q7Z2Z2 1120 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 P2RY8Q86VZ1 359 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC36Q8IYA8 594 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SLC25A45Q8N413 288 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RHOXF1Q8NHV9 184 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RFESDQ8TAC1 157 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FNDC8Q8TC99 324 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SPPL2BQ8TCT7 592 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 WFDC5Q8TCV5 224 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GIPC3Q8TF64 312 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 STARD8Q92502 1023 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TAF4BQ92750 862 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ART4Q93070 314 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FBXO32Q969P5 355 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MCHR2Q969V1 340 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PINX1Q96BK5 328 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SLC25A36Q96CQ1 311 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PIWIL1Q96J94 861 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ELMO2Q96JJ3 720 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 IFT74Q96LB3 600 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 C9orf85Q96MD7 179 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 XPO6Q96QU8 1125 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RIT2Q99578 217 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FICDQ9BVA6 458 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NUP58Q9BVL2 599 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NEUROG2Q9H2A3 272 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TCEAL2Q9H3H9 227 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 KAT8Q9H7Z6 458 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ACTR8Q9H981 624 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TIGARQ9NQ88 270 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 IMPAD1Q9NX62 359 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TAS2R3Q9NYW6 316 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ATXN10Q9UBB4 475 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 UXTQ9UBK9 157 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PRODH2Q9UF12 536 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MGAT4BQ9UQ53 548 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MGAM2Q2M2H8 2515 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NBEAL2Q6ZNJ1 2754 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HRNRQ86YZ3 2850 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MPDZO75970 2070 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ATP8B3O60423 1300 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PHLPP2Q6ZVD8 1323 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NUP210LQ5VU65 1888 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 DNAJC13O75165 2243 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TRBV7-9A0A0J9YWB2 115 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RGSL1A5PLK6 1076 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GOLGA8IPA6NC78 632 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RNF222A6NCQ9 220 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZSCAN5CA6NGD5 496 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FBLL1A6NHQ2 334 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCT8L1PA6NM43 557 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GOLGA8JA6NMD2 632 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 F8WDY8 70 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SAP18O00422 153 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 LCMT2O60294 686 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SCGB2A1O75556 95 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RHBDL1O75783 438 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ANXA4P09525 319 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 IGFBP5P24593 272 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 DPP4P27487 766 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 UGT1A5P35504 534 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ARL2P36404 184 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NAMPTP43490 491 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HTR5AP47898 357 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 POU3F4P49335 361 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 STK19P49842 368 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ARHGDIBP52566 201 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HSF2Q03933 536 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 KLRB1Q12918 225 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SCGB2A2Q13296 93 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 EXOSC2Q13868 293 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SLC10A1Q14973 349 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms