RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PITPNAQ00169 270 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 PRTGQ2VWP7 1150 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 CCDC58Q4VC31 144 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 KIAA0895LQ68EN5 471 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 SYS1Q8N2H4 156 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 ARHGEF39Q8N4T4 335 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 DNAAF1Q8NEP3 725 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR8H1Q8NGG4 311 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF431Q8TF32 576 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 GIMAP1Q8WWP7 306 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 HOXB13Q92826 284 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 GAL3ST4Q96RP7 486 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR8D2Q9GZM6 311 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 SPRTNQ9H040 489 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 NANSQ9NR45 359 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 RXFP3Q9NSD7 469 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 IKZF2Q9UKS7 526 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 MMP17Q9ULZ9 603 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 KLHDC2Q9Y2U9 406 aa14.32□□□□□ -0.12
ARHGEF40-203ENST00000554514 EFCAB7A8K855 629 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 STPG1Q5TH74 334 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF595Q8IYB9 648 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 PRSS58Q8IYP2 241 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF563Q8TA94 476 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF524Q96C55 264 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 KLHDC7BQ96G42 594 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ADAD1Q96M93 576 aaKnown RBP14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 GFI1Q99684 422 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 NRSN2Q9GZP1 204 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 SYNDIG1Q9H7V2 258 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ING1Q9UK53 422 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 RCE1Q9Y256 329 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 CLDN16Q9Y5I7 305 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 NUBP2Q9Y5Y2 271 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF879B4DU55 563 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 DCTN6O00399 190 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 PPM1BO75688 479 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 MMP15P51511 669 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 GAS6Q14393 721 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 NKAIN2Q5VXU1 208 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 FAAP20Q6NZ36 180 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 TEX19Q8NA77 164 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 SLC38A3Q99624 504 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 GHITMQ9H3K2 345 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ING4Q9UNL4 249 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 H2AFB2P0C5Z0 115 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR1D4P47884 311 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 GNG2P59768 71 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 ALG10Q5BKT4 473 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 APOOLQ6UXV4 268 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 KANSL1Q7Z3B3 1105 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 LIX1LQ8IVB5 337 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 SLITRK4Q8IW52 837 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 SCMH1Q96GD3 660 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 HYLS1Q96M11 299 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 LIN7BQ9HAP6 207 aa14.31□□□□□ -0.12
ARHGEF40-203ENST00000554514 KHNYNO15037 678 aaKnown RBP14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 TOXO94900 526 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 GGTLC2Q14390 218 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 ST3GAL2Q16842 350 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 PRAMEF17Q5VTA0 474 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 C9orf62Q8N4C0 152 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 LMX1AQ8TE12 382 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 RGP1Q92546 391 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 ADOQ96SZ5 270 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 SLCO1C1Q9NYB5 712 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 GMDSO60547 372 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 GLCEO94923 617 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 FCER2P06734 321 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 PROS1P07225 676 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 PSMD4P55036 377 aaKnown RBP14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 GRM7Q14831 915 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 UBE2NLQ5JXB2 153 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 OVCH1Q7RTY7 1134 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF615Q8N8J6 731 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 CEP76Q8TAP6 659 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 CDCP1Q9H5V8 836 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 FBXO9Q9UK97 447 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 CAMK2AQ9UQM7 478 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 ZNF281Q9Y2X9 895 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 EML5Q05BV3 1969 aa14.3□□□□□ -0.12
ARHGEF40-203ENST00000554514 IGHV5-51A0A0C4DH38 117 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 SCDO00767 359 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 GATBO75879 557 aaKnown RBP14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 UBL4AP11441 157 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 CENPAP49450 140 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 TMEM255AQ5JRV8 349 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR11H4Q8NGC9 324 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR6N2Q8NGY6 317 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR52I2Q8NH67 350 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 TSLPQ969D9 159 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 KTI12Q96EK9 354 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 ULBP3Q9BZM4 244 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 NXF5Q9H1B4 397 aaKnown RBP14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 OR10A4Q9H209 315 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 UCKL1Q9NWZ5 548 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 ANKRD10Q9NXR5 420 aa14.29□□□□□ -0.12
ARHGEF40-203ENST00000554514 KLK11Q9UBX7 282 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms