RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 PPP3CBP16298 524 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 RGS8P57771 180 aaPredicted RBP8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 YPEL5P62699 121 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 OC90Q02509 493 aaPredicted RBP8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 CCINQ13939 588 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 FHL5Q5TD97 284 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 OR5M10Q6IEU7 315 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 QSOX2Q6ZRP7 698 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GDF7Q7Z4P5 450 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 SLITRK4Q8IW52 837 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 OR56B4Q8NH76 319 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 BAHD1Q8TBE0 780 aaPredicted RBP8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GPBAR1Q8TDU6 330 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 TMEM255BQ8WV15 326 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 SDF2Q99470 211 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 MCHR1Q99705 422 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GAREM1Q9H706 876 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 ADAP2Q9NPF8 381 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 CALML5Q9NZT1 146 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GHRLQ9UBU3 117 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 TESQ9UGI8 421 aaKnown RBP8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 IL20RAQ9UHF4 553 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 KCNE5Q9UJ90 142 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 WDR45Q9Y484 360 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 E9PI62 339 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 CH25HO95992 272 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 CT62P0C5K7 136 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 TFPIP10646 304 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 PRG2P13727 222 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GABRA1P14867 456 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GPR4P46093 362 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 UBE2IP63279 158 aaKnown RBP8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 SHC2P98077 582 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 NDUFA9Q16795 377 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 DEFB110Q30KQ9 67 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 EOGTQ5NDL2 527 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 Q6ZTK2 550 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 LDLRAD3Q86YD5 345 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 PUSL1Q8N0Z8 303 aaKnown RBP8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 LINC00471Q8N535 108 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 CAMKVQ8NCB2 501 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 GNPDA2Q8TDQ7 276 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 WNT2BQ93097 391 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 FAM60AQ9NP50 221 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 PTGFRNQ9P2B2 879 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
AL049839.2-201ENST00000553947 PLSCR5A0PG75 271 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 DUXAA6NLW8 204 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 CYR61O00622 381 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 SUSD5O60279 629 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 PRAMEF2O60811 474 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 FZD7O75084 574 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 TNFP01375 233 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 GNSP15586 552 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 TYRP1P17643 537 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 TLX1P31314 330 aaPredicted RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 NR0B1P51843 470 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ZNF136P52737 540 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ST3GAL3Q11203 375 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 TSPAN31Q12999 210 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 PDZK1IP1Q13113 114 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ALKBH1Q13686 389 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 EXOSC7Q15024 291 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 SLC30A6Q6NXT4 461 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 DGAT2L6Q6ZPD8 337 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ABHD13Q7L211 337 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 LHFPL3Q86UP9 236 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 OR5M9Q8NGP3 310 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 OR4Q3Q8NH05 313 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 RSC1A1Q92681 617 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ZC3H10Q96K80 434 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 ABHD1Q96SE0 405 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 SPSB2Q99619 263 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 MTHFD2LQ9H903 347 aaPredicted RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 IL21RQ9HBE5 538 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 HS3ST3A1Q9Y663 406 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 VCANP13611 3396 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 G3V3Q6 166 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 PEX12O00623 359 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 UBXN7O94888 489 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 HLA-DPB1P04440 258 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 EIF4EP06730 217 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 GKN3PP0CG01 181 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 GSTM3P21266 225 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 GABRA5P31644 462 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 CD79BP40259 229 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 VEGFCP49767 419 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 SEC61A1P61619 476 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 MGAT2Q10469 447 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 FZD2Q14332 565 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 SLC25A30Q5SVS4 291 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 BTN2A1Q7KYR7 527 aa8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 LRRC28Q86X40 367 aaPredicted RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 FAM160A2Q8N612 972 aaPredicted RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 RERGQ96A58 199 aaPredicted RBP8.29□□□□□ -1.08
AL049839.2-201ENST00000553947 FBXO17Q96EF6 278 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms