RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 HOXB7P09629 217 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CT62P0C5K7 136 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ZSCAN5DPP0CG00 497 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ZNF853P0CG23 659 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 NR2C1P13056 603 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 MGMTP16455 207 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 OXTRP30559 389 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 HTR1FP30939 366 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 EPHX2P34913 555 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 LEPP41159 167 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 MAP3K8P41279 467 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SLC1A1P43005 524 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CX3CR1P49238 355 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 DAP3P51398 398 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 CCNG1P51959 295 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 BLVRAP53004 296 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 MFAP2P55001 183 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 UBE2MP61081 183 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 SKP1P63208 163 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 LCN2P80188 198 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 RAD51Q06609 339 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ZNF33BQ06732 778 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 RIPPLY1Q0D2K3 151 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CCDC173Q0VFZ6 552 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ELAVL2Q12926 359 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 ART3Q13508 389 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 OR5I1Q13606 314 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 KIAA0141Q14154 515 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 FASTKQ14296 549 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 MTF1Q14872 753 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 MLF2Q15773 248 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 USF2Q15853 346 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 RNF212Q495C1 297 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 XKR4Q5GH76 650 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SAMD4BQ5PRF9 694 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 MUC21Q5SSG8 566 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 MEDAGQ5VYS4 303 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 FAM219BQ5XKK7 198 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 WDR25Q64LD2 544 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 REP15Q6BDI9 236 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ULK3Q6PHR2 472 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CEACAM19Q7Z692 300 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SLC47A2Q86VL8 602 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 RBM45Q8IUH3 476 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 ZNF547Q8IVP9 402 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 LRRC8AQ8IWT6 810 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 NELFCDQ8IXH7 590 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CMTM1Q8IZ96 169 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SELENOHQ8IZQ5 122 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 MYOCDQ8IZQ8 938 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SLC34A3Q8N130 599 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SLC39A11Q8N1S5 342 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 OR2L13Q8N349 312 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 TRAM1L1Q8N609 369 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 EID2Q8N6I1 236 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 TPRX1Q8N7U7 411 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SUMF1Q8NBK3 374 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 TRPV1Q8NER1 839 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 OR10G8Q8NGN5 311 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SLC7A13Q8TCU3 470 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 TCP10LQ8TDR4 215 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 GPR151Q8TDV0 419 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 IL1F10Q8WWZ1 152 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 NDRG1Q92597 394 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 GTF3AQ92664 365 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 UFD1Q92890 307 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 FGF11Q92914 225 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 STMN2Q93045 179 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 FAM131CQ96AQ9 280 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 C8orf44Q96CB5 159 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CNRIP1Q96F85 164 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 GLT1D1Q96MS3 346 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ZNF396Q96N95 335 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 CYP2S1Q96SQ9 504 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CYTH2Q99418 400 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SOSTQ9BQB4 213 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 NIPSNAP3BQ9BS92 247 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 UPF3BQ9BZI7 483 aaKnown RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 UCK2Q9BZX2 261 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 HOXD1Q9GZZ0 328 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 GBA3Q9H227 469 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PIGUQ9H490 435 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 GLIPR2Q9H4G4 154 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 REEP4Q9H6H4 257 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PARVGQ9HBI0 331 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 RETNQ9HD89 108 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 DMAP1Q9NPF5 467 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 IL1RAPQ9NPH3 570 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ZNF275Q9NSD4 429 aaPredicted RBP1.83□□□□□ -2.12
SRP54-204ENST00000553923 DEPPQ9NTK1 212 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 ELOVL2Q9NXB9 296 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CTSFQ9UBX1 484 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CLN8Q9UBY8 286 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PHF11Q9UIL8 331 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 RARRES3Q9UL19 164 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SCML2Q9UQR0 700 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CSNK1G3Q9Y6M4 447 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 USP47Q96K76 1375 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PLEKHH1Q9ULM0 1364 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms