RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SLX4IPQ5VYV7 408 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 RPUSD3Q6P087 351 aaKnown RBP13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SLC27A4Q6P1M0 643 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 C3orf33Q6P1S2 294 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 HIST3H2AQ7L7L0 130 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 GTPBP8Q8N3Z3 284 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-208ENST00000553868 OR2M7Q8NG81 312 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 LIPHQ8WWY8 451 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 HIST1H2ACQ93077 130 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 GNRHR2Q96P88 292 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SIGLEC12Q96PQ1 595 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SLC38A2Q96QD8 506 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SLC25A19Q9HC21 320 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 IL20Q9NYY1 176 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 PLA2G3Q9NZ20 509 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF229Q9UJW7 825 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 BAIAP2Q9UQB8 552 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 MRPS18CQ9Y3D5 142 aaKnown RBP13.01□□□□□ -0.33
SHMT2-208ENST00000553868 TMEM72A0PK05 275 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 CDC42EP2O14613 210 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 NME2P1O60361 137 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 CLIC3O95833 236 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 CH25HO95992 272 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 F10P00742 488 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 HMGN1P05114 100 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 FUT1P19526 365 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 NME2P22392 152 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 SLC6A6P31641 620 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 GIPRP48546 466 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 GINS1Q14691 196 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 TOMM20Q15388 145 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF74Q16587 644 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 FAM69AQ5T7M9 428 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 C1orf140Q5VVS0 124 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 SMARCD3Q6STE5 483 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 MEX3DQ86XN8 651 aaKnown RBP13□□□□□ -0.33
SHMT2-208ENST00000553868 P3H2Q8IVL5 708 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 OR2T33Q8NG76 320 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 OR13C2Q8NGS9 318 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 FAM81AQ8TBF8 368 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF524Q96C55 264 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 PIGQQ9BRB3 760 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 TSSK6Q9BXA6 273 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
SHMT2-208ENST00000553868 POTEKPQ9BYX7 375 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 LIME1Q9H400 295 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 FKRPQ9H9S5 495 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 NANSQ9NR45 359 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 TUBA8Q9NY65 449 aaPredicted RBP13□□□□□ -0.33
SHMT2-208ENST00000553868 SIGLEC7Q9Y286 467 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 HRH3Q9Y5N1 445 aa13□□□□□ -0.33
SHMT2-208ENST00000553868 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 LRRC3CA6NJW4 275 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 GJE1A6NN92 205 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 B4DXG7 233 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 LINC01387J3KSC0 135 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 SLC19A2O60779 497 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 NPIPB7O75200 414 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 NDUFB2O95178 105 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TNFAIP8O95379 198 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TP53P04637 393 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TFPIP10646 304 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 GTF2E2P29084 291 aaKnown RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 EPHA2P29317 976 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 PRPS1P60891 318 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 GPR85P60893 370 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 ADAM8P78325 824 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 CDK5Q00535 292 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TEKQ02763 1124 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TOP3AQ13472 1001 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF766Q5HY98 468 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 RAET1LQ5VY80 246 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 C12orf73Q69YU5 71 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 BIVMQ86UB2 503 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 KIF18BQ86Y91 864 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 KTI12Q96EK9 354 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-208ENST00000553868 TAPBPLQ9BX59 468 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 ASPNQ9BXN1 380 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 OR52D1Q9H346 318 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 EGLN3Q9H6Z9 239 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 DEPPQ9NTK1 212 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 CORINQ9Y5Q5 1042 aa12.99□□□□□ -0.33
SHMT2-208ENST00000553868 INTS1Q8N201 2190 aaKnown RBP12.98□□□□□ -0.33
SHMT2-208ENST00000553868 CPAMD8Q8IZJ3 1885 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 TRAV17A0A0B4J275 112 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 A0A0G2JMM0 328 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 A0A1W2PPB8 328 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 A0A1W2PRS3 328 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 KIR3DP1A8MWS1 328 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 ACOT7O00154 380 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 PTP4A3O75365 173 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 GDF1P27539 372 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 GRK5P34947 590 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 IDUAP35475 653 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 RPS5P46782 204 aaKnown RBP12.98□□□□□ -0.33
SHMT2-208ENST00000553868 TNFSF10P50591 281 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms