RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TRAPPC4Q9Y296 219 aa12.64□□□□□ -0.39
PRKCH-206ENST00000553830 CORINQ9Y5Q5 1042 aa12.64□□□□□ -0.39
PRKCH-206ENST00000553830 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
PRKCH-206ENST00000553830 ARHGAP21Q5T5U3 1957 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 A0A1B0GVC2 190 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 TPOP07202 933 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ABOP16442 354 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ENPP1P22413 925 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 UQCRC1P31930 480 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 CAPGP40121 348 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 CTXN1P60606 82 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 RAC3P60763 192 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ESRRGP62508 458 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 PUDPQ08623 228 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 FHL1Q13642 323 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 C1DQ13901 141 aaKnown RBP12.63□□□□□ -0.39
PRKCH-206ENST00000553830 PON3Q15166 354 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 PTGES3Q15185 160 aaKnown RBP12.63□□□□□ -0.39
PRKCH-206ENST00000553830 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ZNF324BQ6AW86 544 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-206ENST00000553830 TMEM225Q6GV28 225 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ZNF585AQ6P3V2 769 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 GFRALQ6UXV0 394 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 FGD2Q7Z6J4 655 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 OR4Q3Q8NH05 313 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 LIPHQ8WWY8 451 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 TUBA1CQ9BQE3 449 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 KATNB1Q9BVA0 655 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 POLDIP3Q9BY77 421 aaKnown RBP12.63□□□□□ -0.39
PRKCH-206ENST00000553830 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 PNPLA3Q9NST1 481 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 TAS2R5Q9NYW4 299 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 HIF3AQ9Y2N7 669 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ADAM18Q9Y3Q7 739 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 GMPPBQ9Y5P6 360 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 IER3IP1Q9Y5U9 82 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
PRKCH-206ENST00000553830 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
PRKCH-206ENST00000553830 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 SHANK1Q9Y566 2161 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 LOC100130705A0A1B0GUX0 176 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 CLCA1A8K7I4 914 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 MS4A18H0YCH9 400 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 SMAD9O15198 467 aaKnown RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 EIF1BO60739 113 aaKnown RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 HLA-DOBP13765 273 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 NOS3P29474 1203 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 PTGS2P35354 604 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 HSPA13P48723 471 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 TDGF1P3P51864 188 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 PRPS1P60891 318 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 RPS4XP62701 263 aaKnown RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 MELKQ14680 651 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 ZNF239Q16600 458 aaKnown RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 PGGHGQ32M88 737 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 MS4A18Q3C1V0 323 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 KRTCAP3Q53RY4 240 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 RPL13AP3Q6NVV1 102 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 PAQR6Q6TCH4 344 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 CD163Q86VB7 1156 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 SCAIQ8N9R8 606 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 ZNF775Q96BV0 537 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 ERMAPQ96PL5 475 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 TRIB1Q96RU8 372 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 GRIP2Q9C0E4 1043 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 IL20Q9NYY1 176 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
PRKCH-206ENST00000553830 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
PRKCH-206ENST00000553830 DOCK7Q96N67 2140 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 A0A1W2PRG6 482 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 ZAR1LA6NP61 321 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 KDM4EB2RXH2 506 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-206ENST00000553830 H0YJX3 145 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 GNAO1P09471 354 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 CPN1P15169 458 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 SMSP52788 366 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
PRKCH-206ENST00000553830 MYBPC1Q00872 1141 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 EEF1A1P5Q5VTE0 462 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 ACSM5Q6NUN0 579 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 SLC27A4Q6P1M0 643 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 P4HA3Q7Z4N8 544 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 UEVLDQ8IX04 471 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 LRRC75AQ8NAA5 344 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 LSM14AQ8ND56 463 aaKnown RBP12.61□□□□□ -0.39
PRKCH-206ENST00000553830 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 CPT1CQ8TCG5 803 aa12.61□□□□□ -0.39
PRKCH-206ENST00000553830 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms