RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CXCR6O00574 342 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 SHOX2O60902 331 aaPredicted RBP17.93■□□□□ 0.46
FOXA1-203ENST00000553751 SELENOPP49908 381 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 SELENOWP63302 87 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 TIMM23BQ5SRD1 257 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 LURAP1LQ8IV03 231 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 SCAIQ8N9R8 606 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 POMGNT2Q8NAT1 580 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 TPD52L3Q96J77 140 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 OXGR1Q96P68 337 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 PRSS27Q9BQR3 290 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 TMEM204Q9BSN7 226 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 ASPNQ9BXN1 380 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 AMBRA1Q9C0C7 1298 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 POLR2J2Q9GZM3 115 aaKnown RBP17.93■□□□□ 0.46
FOXA1-203ENST00000553751 POLR2J3Q9H1A7 115 aaKnown RBP17.93■□□□□ 0.46
FOXA1-203ENST00000553751 SPAG4Q9NPE6 437 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 UPB1Q9UBR1 384 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 EDARQ9UNE0 448 aa17.93■□□□□ 0.46
FOXA1-203ENST00000553751 RAI1Q7Z5J4 1906 aaPredicted RBP17.92■□□□□ 0.46
FOXA1-203ENST00000553751 LOC102725191A0A1B0GVB3 256 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 NDUFAB1O14561 156 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 HPRP00739 348 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 ZNF43P17038 809 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 DNASE1P24855 282 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 LGALS3BPQ08380 585 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 PPA1Q15181 289 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 GABRA6Q16445 453 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 NIPAL3Q6P499 406 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 TTC33Q6PID6 262 aaPredicted RBP17.92■□□□□ 0.46
FOXA1-203ENST00000553751 P2RY8Q86VZ1 359 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 LRRC37BQ96QE4 947 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 SLC19A3Q9BZV2 496 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 MRPL39Q9NYK5 338 aaKnown RBP17.92■□□□□ 0.46
FOXA1-203ENST00000553751 RCE1Q9Y256 329 aa17.92■□□□□ 0.46
FOXA1-203ENST00000553751 CIB4A0PJX0 185 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 MS4A18H0YCH9 400 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 TRAF3IP2O43734 574 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-203ENST00000553751 DCTN3O75935 186 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ZNF432O94892 652 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 OR5F1O95221 314 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 MT-ATP6P00846 226 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 NQO1P15559 274 aaKnown RBP17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ART1P52961 327 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 CLDN17P56750 224 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 TAS2R41P59536 307 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 PIN1Q13526 163 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-203ENST00000553751 KEAP1Q14145 624 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ZNF74Q16587 644 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 MS4A18Q3C1V0 323 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 C9orf135Q5VTT2 229 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ZNF704Q6ZNC4 412 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-203ENST00000553751 VTCN1Q7Z7D3 282 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 C10orf53Q8N6V4 93 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ANKS4BQ8N8V4 417 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 MBD6Q96DN6 1003 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 MUS81Q96NY9 551 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ALKBH3Q96Q83 286 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-203ENST00000553751 CCT8L2Q96SF2 557 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 KCTD14Q9BQ13 255 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-203ENST00000553751 NGBQ9NPG2 151 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 ARL8BQ9NVJ2 186 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 FAM53CQ9NYF3 392 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 NPAP1Q9NZP6 1156 aa17.91■□□□□ 0.46
FOXA1-203ENST00000553751 OR6C65A6NJZ3 312 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 KPNA4O00629 521 aaPredicted RBP17.9■□□□□ 0.46
FOXA1-203ENST00000553751 GSTA4O15217 222 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 PLAUP00749 431 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 CD53P19397 219 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 MPGP29372 298 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 PUDPQ08623 228 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 PMS2P3Q13401 168 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 C1DQ13901 141 aaKnown RBP17.9■□□□□ 0.46
FOXA1-203ENST00000553751 NCMAPQ5T1S8 102 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 OR7E24Q6IFN5 339 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 LINGO2Q7L985 606 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 SSX8Q7RTT4 187 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 NKAIN4Q8IVV8 208 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 C1orf162Q8NEQ5 155 aaPredicted RBP17.9■□□□□ 0.46
FOXA1-203ENST00000553751 LZICQ8WZA0 190 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 MUCL1Q96DR8 90 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 FOXC2Q99958 501 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 CXXC4Q9H2H0 198 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 UBTD1Q9HAC8 227 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 MEPEQ9NQ76 525 aaPredicted RBP17.9■□□□□ 0.46
FOXA1-203ENST00000553751 TAGLN3Q9UI15 199 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 F8P00451 2351 aa17.9■□□□□ 0.46
FOXA1-203ENST00000553751 HIVEP1P15822 2718 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 PLPP3O14495 311 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 UPK3AO75631 287 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 ZNF682O95780 498 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 CH25HO95992 272 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 SERPINA1P01009 418 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 HLA-DOBP13765 273 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 NCK1P16333 377 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 IL1RL1Q01638 556 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 POU3F1Q03052 451 aaPredicted RBP17.89■□□□□ 0.45
FOXA1-203ENST00000553751 ACKR1Q16570 336 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 NHLRC1Q6VVB1 395 aa17.89■□□□□ 0.45
FOXA1-203ENST00000553751 CBLL1Q75N03 491 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms