RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 OR51G2Q8NGK0 314 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 CTNNBL1Q8WYA6 563 aaPredicted RBP1.84□□□□□ -2.11
VRK1-202ENST00000553683 NDRG1Q92597 394 aaKnown RBP1.84□□□□□ -2.11
VRK1-202ENST00000553683 TM4SF19Q96DZ7 209 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 SH3YL1Q96HL8 342 aaPredicted RBP1.84□□□□□ -2.11
VRK1-202ENST00000553683 TSG101Q99816 390 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 SH3GL3Q99963 347 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 UQCC2Q9BRT2 126 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 ROGDIQ9GZN7 287 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 IFI27L2Q9H2X8 130 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 PARVGQ9HBI0 331 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 GLRX2Q9NS18 164 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 GNG12Q9UBI6 72 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 PRELID1Q9Y255 219 aa1.84□□□□□ -2.11
VRK1-202ENST00000553683 CAB39Q9Y376 341 aaPredicted RBP1.84□□□□□ -2.11
VRK1-202ENST00000553683 MAP3K19Q56UN5 1328 aa1.84□□□□□ -2.12
VRK1-202ENST00000553683 MROH5Q6ZUA9 1318 aa1.84□□□□□ -2.12
VRK1-202ENST00000553683 PCF11O94913 1555 aaKnown RBP1.84□□□□□ -2.12
VRK1-202ENST00000553683 PHF3Q92576 2039 aaKnown RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 A0A087WZY1 265 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TMEM150BA6NC51 233 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 KRT87PA6NCN2 255 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 A6NIZ1 184 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 CCDC169A6NNP5 214 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 G3V4G9 280 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 K7EPI3 171 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 L7N2F9 121 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 SGK1O00141 431 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 DCTN6O00399 190 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 DYNC1I1O14576 645 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 CETN3O15182 167 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 SLC31A2O15432 143 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TAPBPO15533 448 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 LANCL1O43813 399 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TPST2O60704 377 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 SPAG7O75391 227 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 RHOXF2BP0C7M4 288 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 RDXP35241 583 aaKnown RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 NMUP48645 174 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 ARRB1P49407 418 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 HSPA2P54652 639 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 HADHBP55084 474 aaKnown RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 RAP1BP61224 184 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TGFBR3Q03167 851 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 ENPEPQ07075 957 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 ASPHQ12797 758 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 CUL1Q13616 776 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 CUL2Q13617 745 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 MXD4Q14582 209 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 STK11Q15831 433 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 C5orf47Q569G3 176 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TIGD3Q6B0B8 471 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 CTRB2Q6GPI1 263 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 FRMPD2BQ6IN97 320 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 ZYG11AQ6WRX3 759 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 ERASQ7Z444 233 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 RALGPS2Q86X27 583 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 CENPLQ8N0S6 344 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 TMEM61Q8N0U2 210 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 DENND6BQ8NEG7 585 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 OR52K1Q8NGK4 314 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 RAET1EQ8TD07 263 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 MCOLN3Q8TDD5 553 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 STARD8Q92502 1023 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 CDKL2Q92772 493 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 PAGE5Q96GU1 130 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TIMD4Q96H15 378 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 FCRL1Q96LA6 429 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 MTMR9Q96QG7 549 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 SPIN2AQ99865 258 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 SPIN2BQ9BPZ2 258 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 RHOXF2Q9BQY4 288 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TSGA10Q9BZW7 698 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 STMN4Q9H169 189 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 RANBP3Q9H6Z4 567 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 TM9SF3Q9HD45 589 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 SLC25A37Q9NYZ2 338 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 TMED5Q9Y3A6 229 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 KIF26AQ9ULI4 1882 aaPredicted RBP1.83□□□□□ -2.12
VRK1-202ENST00000553683 MYO3BQ8WXR4 1341 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 KANK1Q14678 1352 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 PLEKHH1Q9ULM0 1364 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 PTPRTO14522 1441 aa1.83□□□□□ -2.12
VRK1-202ENST00000553683 A0A0C4DFX4 3053 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 PKD1L2Q7Z442 2459 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 SETBP1Q9Y6X0 1596 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 IGLV11-55A0A075B6I3 123 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 IGKV1D-8A0A087WSZ0 117 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 GOLGA6L7A0A1B0GV03 622 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 RGSL1A5PLK6 1076 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 OR5K4A6NMS3 321 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 TRDCB7Z8K6 153 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 MAPK13O15264 365 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 YKT6O15498 198 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 SPOPO43791 374 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 SMPD2O60906 423 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 N4BP1O75113 896 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 SCGB2A1O75556 95 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 PTBP3O95758 552 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 MOSP00540 346 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms