RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 BCHEP06276 602 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 GKN3PP0CG01 181 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 CREB1P16220 341 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 BGNP21810 368 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 IGFBP5P24593 272 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 NR4A2P43354 598 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 VSNL1P62760 191 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 TUBA1BP68363 451 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 TUBA4AP68366 448 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 NPRL3Q12980 569 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 BNIP2Q12982 314 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 STX3Q13277 289 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 C1DQ13901 141 aaKnown RBP8.65□□□□□ -1.02
ACTN1-208ENST00000553370 CASP8Q14790 479 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 GSTA3Q16772 222 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 TBRG1Q3YBR2 411 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 FAM120AOSQ5T036 256 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 LIPNQ5VXI9 398 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 ATG16L1Q676U5 607 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 WBP2NLQ6ICG8 309 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 TUBA1AQ71U36 451 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 LRRC34Q8IZ02 419 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 ARIH2OSQ8N7S6 290 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 OR52P1PQ8NH57 321 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 SLC25A36Q96CQ1 311 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 ZG16BQ96DA0 208 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 SORCS2Q96PQ0 1159 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 C19orf24Q9BVV8 132 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 CA10Q9NS85 328 aa8.65□□□□□ -1.02
ACTN1-208ENST00000553370 A0A096LNT2 108 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 A0A096LPI6 279 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 IGHV1-18A0A0C4DH31 117 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 TRPC5OSA6NMA1 111 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 B9A039 149 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 C5orf58C9J3I9 102 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 PDLIM1O00151 329 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 FAAHO00519 579 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 TM9SF1O15321 606 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 FRS3O43559 492 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 TYROBPO43914 113 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 VAMP5O95183 116 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 TGFAP01135 160 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 PGRP06401 933 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 OR4A8P0C604 315 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 SNRPBP14678 240 aaKnown RBP8.64□□□□□ -1.03
ACTN1-208ENST00000553370 PAX7P23759 505 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 NTF4P34130 210 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 SELENOPP49908 381 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 CRISP3P54108 245 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 SH3BGRP55822 239 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-208ENST00000553370 UFM1P61960 85 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 H3F3AP84243 136 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 SQLEQ14534 574 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 C1orf140Q5VVS0 124 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF836Q6ZNA1 936 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 GPR137CQ8N3F9 429 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 OR4F15Q8NGB8 312 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 OR1K1Q8NGR3 316 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF385AQ96PM9 386 aaKnown RBP8.64□□□□□ -1.03
ACTN1-208ENST00000553370 KATNB1Q9BVA0 655 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 SLC38A1Q9H2H9 487 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 RMND5AQ9H871 391 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 FBXO9Q9UK97 447 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-208ENST00000553370 RASD1Q9Y272 281 aa8.64□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF443Q9Y2A4 671 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-208ENST00000553370 ANK2Q01484 3957 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ELOA3CA0A087WX78 387 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-208ENST00000553370 hCG_2039718K7EN88 272 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 SLC43A1O75387 559 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 PDE5AO76074 875 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 KITP10721 976 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF43P17038 809 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 APEX1P27695 318 aaKnown RBP8.63□□□□□ -1.03
ACTN1-208ENST00000553370 CDKN2CP42773 168 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ETV4P43268 484 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 MAP2K3P46734 347 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 IDH3GP51553 393 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-208ENST00000553370 CHN2P52757 468 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 CLDN17P56750 224 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 DSTNP60981 165 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 NCALDP61601 193 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 SRSF2Q01130 221 aaKnown RBP8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ROR2Q01974 943 aaKnown RBP8.63□□□□□ -1.03
ACTN1-208ENST00000553370 LGALS3BPQ08380 585 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ZSWIM7Q19AV6 140 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 KRTAP24-1Q3LI83 254 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 C6orf10Q5SRN2 563 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ANKRD16Q6P6B7 361 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 SPATA21Q7Z572 469 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 VRK2Q86Y07 508 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ANKRD42Q8N9B4 389 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 MSI2Q96DH6 328 aaKnown RBP8.63□□□□□ -1.03
ACTN1-208ENST00000553370 ANKRD27Q96NW4 1050 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 FOXN4Q96NZ1 517 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 BPESC1Q9GZL8 116 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 MEAF6Q9HAF1 191 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 PNPOQ9NVS9 261 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 AIG1Q9NVV5 245 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 RLIMQ9NVW2 624 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms