RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CDHR4A6H8M9 788 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 LYNX1G3V0Z9 82 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 RPL36A-HNRNPH2H7BZ11 118 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 AHSA1O95433 338 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 GKN3PP0CG01 181 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 LYNX1P0DP58 116 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 NCF2P19878 526 aaPredicted RBP12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 GTF2E2P29084 291 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 S100A3P33764 101 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 GPR6P46095 362 aaPredicted RBP12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 CAPZA2P47755 286 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 EVX1P49640 407 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 LIN52Q52LA3 116 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 SPANXN4Q5MJ08 99 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 REP15Q6BDI9 236 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 MYPOPQ86VE0 399 aaPredicted RBP12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 GPR137CQ8N3F9 429 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 GCDHQ92947 438 aaPredicted RBP12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 TMEM186Q96B77 213 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 PANX1Q96RD7 426 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 TPK1Q9H3S4 243 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 NOX3Q9HBY0 568 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 CRLF2Q9HC73 371 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 RLIMQ9NVW2 624 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 USP22Q9UPT9 525 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 SPEF1Q9Y4P9 236 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 CCDC154A6NI56 674 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 E9PBE3 544 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 M0R233 179 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 SYNGR3O43761 229 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 TFP02787 698 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 BPGMP07738 259 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 MYZAPP0CAP1 466 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 SAGP10523 405 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF43P17038 809 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 CLDN17P56750 224 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 SLC9B1Q4ZJI4 515 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 KRT80Q6KB66 452 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 MDP1Q86V88 176 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 OR52P1PQ8NH57 321 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 OR51F2Q8NH61 342 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 KIF18AQ8NI77 898 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 STK35Q8TDR2 534 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 CACYBPQ9HB71 228 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 GPR35Q9HC97 309 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 CALML5Q9NZT1 146 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 REV1Q9UBZ9 1251 aa12.24□□□□□ -0.45
CHMP1A-210ENST00000551981 TMEM229AB2RXF0 380 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 FAM157AC9JC47 383 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 AKAP8O43823 692 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 NPIPB7O75200 414 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 MSMBP08118 114 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 IGFBP1P08833 259 aaPredicted RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 PNMTP11086 282 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 NR4A1P22736 598 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 ACAA2P42765 397 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 LRRC74AQ0VAA2 488 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 C1DQ13901 141 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 LARS2Q15031 903 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 CEACAM16Q2WEN9 425 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 RNF220Q5VTB9 566 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF836Q6ZNA1 936 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF621Q6ZSS3 439 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 PIK3C3Q8NEB9 887 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 FAM216AQ8WUB2 273 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 RDH5Q92781 318 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 MRPL24Q96A35 216 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 SLC25A36Q96CQ1 311 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 JMJD8Q96S16 334 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 RBM4Q9BWF3 364 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 ARMC7Q9H6L4 198 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 NARFLQ9H6Q4 476 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 LPAR2Q9HBW0 351 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 P2RX2Q9UBL9 471 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 PCDHB10Q9UN67 800 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 NOX1Q9Y5S8 564 aa12.23□□□□□ -0.45
CHMP1A-210ENST00000551981 TMEM89A2RUT3 159 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF99A8MXY4 864 aaPredicted RBP12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF432O94892 652 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 KRT75O95678 551 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 C1QCP02747 245 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 EGR1P18146 543 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 LBPP18428 481 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ACHEP22303 614 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 HILS1P60008 231 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 RPS23P62266 143 aaKnown RBP12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ELFN2Q5R3F8 820 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 COX20Q5RI15 118 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ATG16L1Q676U5 607 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 USP43Q70EL4 1123 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 VRK2Q86Y07 508 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms