RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CDKL3Q8IVW4 592 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 FAM219AQ8IW50 185 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF615Q8N8J6 731 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NAT8LQ8N9F0 302 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 TTC29Q8NA56 475 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 THAP8Q8NA92 274 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 TMEM178AQ8NBL3 297 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ANKRD20A12PQ8NF67 263 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 B3GNT7Q8NFL0 401 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 OR2T12Q8NG77 320 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 OR5M9Q8NGP3 310 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 LINC01560Q8TB33 94 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NUBPLQ8TB37 319 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ZPLD1Q8TCW7 415 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 EEF1AKMT1Q8WVE0 214 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ANKRD49Q8WVL7 239 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SLC13A3Q8WWT9 602 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CTNNBL1Q8WYA6 563 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ANKRD7Q92527 254 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PROX1Q92786 737 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CORO2AQ92828 525 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RNASE6Q93091 150 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HGDQ93099 445 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 STARD4Q96DR4 205 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DCUN1D1Q96GG9 259 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SENP5Q96HI0 755 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NSL1Q96IY1 281 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 C17orf77Q96MU5 243 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 WFIKKN1Q96NZ8 548 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 INTS14Q96SY0 518 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 LPAR4Q99677 370 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF559Q9BR84 538 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DESI2Q9BSY9 194 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ANGPTL4Q9BY76 406 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DEFB127Q9H1M4 99 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RHBGQ9H310 441 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NT5DC2Q9H857 520 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 EVA1AQ9H8M9 152 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CALHM2Q9HA72 323 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 Q9N2K0 584 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 KCNJ16Q9NPI9 418 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 TCF7L2Q9NQB0 619 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 LYARQ9NX58 379 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 QPCTLQ9NXS2 382 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PTTG2Q9NZH5 202 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DNAJB9Q9UBS3 223 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 LEF1Q9UJU2 399 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CES1P1Q9UKY3 287 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 KCNK7Q9Y2U2 307 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 KLF13Q9Y2Y9 288 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 YARS2Q9Y2Z4 477 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 JRKLQ9Y4A0 524 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ASB4Q9Y574 426 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PCDHGB1Q9Y5G3 927 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PHF3Q92576 2039 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DNAH3Q8TD57 4116 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PLCE1Q9P212 2302 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 A0A0U1RQK1 487 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF320A2RRD8 509 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ANKRD61A6NGH8 418 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FAM166BA8MTA8 275 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SMTNL1A8MU46 457 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PRAC2D3DTV9 90 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NPIPA2E9PIF3 369 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NPIPA3F8WFD2 350 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 G3V3Y1 287 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 KLRC4-KLRK1H3BQV0 150 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 H7C0C1 242 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TXNDC9O14530 226 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 BCKDKO14874 412 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PSMD3O43242 534 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 EFNA2O43921 213 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FGF17O60258 216 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NTN1O95631 604 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 IGHV4-39P01824 125 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 RLN1P04808 185 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SNRNP70P08621 437 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CT62P0C5K7 136 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SPP1P10451 314 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MLNP12872 115 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ATP6V1B1P15313 513 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF708P17019 499 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TPSB2P20231 275 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CRYGSP22914 178 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 JAK1P23458 1154 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CXCR2P25025 360 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 EDNRAP25101 427 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CMPK1P30085 196 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FDFT1P37268 417 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CASP3P42574 277 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SLC1A2P43004 574 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MAGEA1P43355 309 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ATP5OP48047 213 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 KCNJ1P48048 391 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NPY2RP49146 381 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 DNASE1L1P49184 302 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TTPAP49638 278 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CDK9P50750 372 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ALDH3A2P51648 485 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 LIM2P55344 173 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms