RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	SDHC	Q99643	169 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	NPAS1	Q99742	590 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	HDHD5	Q9BXW7	423 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	NDEL1	Q9GZM8	345 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	ARRDC1-AS1	Q9H2J1	176 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	GALNT8	Q9NY28	637 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	GRIP1	Q9Y3R0	1128 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	PCDHGB2	Q9Y5G2	931 aa		10.43	□□□□□ -0.74
RAB5C-208	ENST00000551338	PCSK5	Q92824	1860 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	TEX51	A0A1B0GUA7	166 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	SLC35F4	A4IF30	521 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	C2orf72	A6NCS6	295 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338		A8MVM7	634 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	LOC110117498-PIK3R3	F6TDL0	507 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338		J3QLW9	94 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	PLPP2	O43688	288 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	SLC25A12	O75746	678 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	SERPINI2	O75830	405 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	AHSA1	O95433	338 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	GP1BA	P07359	652 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	UMOD	P07911	640 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ZNF19	P17023	458 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	PRKCA	P17252	672 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	CD53	P19397	219 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	GTF2E2	P29084	291 aa	Known RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	GRPR	P30550	384 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	CAPZA2	P47755	286 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	CAV3	P56539	151 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	RUNX1T1	Q06455	604 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	C17orf67	Q0P5P2	114 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	PON3	Q15166	354 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	SGCB	Q16585	318 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ZNF181	Q2M3W8	571 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	TP53I3	Q53FA7	332 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	EMC4	Q5J8M3	183 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	FAM69A	Q5T7M9	428 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	C1orf140	Q5VVS0	124 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	BICRAL	Q6AI39	1079 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	GPR139	Q6DWJ6	353 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	DMKN	Q6E0U4	476 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	LAX1	Q8IWV1	398 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	SYS1	Q8N2H4	156 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	MINDY2	Q8NBR6	621 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	NEIL3	Q8TAT5	605 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ELP5	Q8TE02	316 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ST8SIA1	Q92185	356 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	PGLYRP3	Q96LB9	341 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	CEP19	Q96LK0	163 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ALG12	Q9BV10	488 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	OR11A1	Q9GZK7	315 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	RNF32	Q9H0A6	362 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	TPK1	Q9H3S4	243 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	CCDC86	Q9H6F5	360 aa	Known RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	GALNT9	Q9HCQ5	603 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	RPRD1B	Q9NQG5	326 aa	Known RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ABCB10	Q9NRK6	738 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	TAS2R5	Q9NYW4	299 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	NCDN	Q9UBB6	729 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	GPN3	Q9UHW5	284 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	ZNF346	Q9UL40	294 aa	Known RBP	10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	CMAHP	Q9Y471	501 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338		V9GYH0	126 aa		10.42	□□□□□ -0.74
RAB5C-208	ENST00000551338	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	PRR32	B1ATL7	298 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	FTCDNL1	E5RQL4	147 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338		H7C1C5	153 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	DCTN6	O00399	190 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	CASK	O14936	926 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	MAGEB4	O15481	346 aa	Predicted RBP	10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	OGG1	O15527	345 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	SC5D	O75845	299 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	IGHM	P01871	453 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	HIST1H2AB	P04908	130 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	KLK3	P07288	261 aa	Predicted RBP	10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	CELA2A	P08217	269 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	FBXO45	P0C2W1	286 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	CCKBR	P32239	447 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	HTR3A	P46098	478 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	TMED10	P49755	219 aa	Known RBP	10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	LCN6	P62502	163 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	ACTA2	P62736	377 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	ACTG2	P63267	376 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	HSF2	Q03933	536 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	FOXF1	Q12946	379 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	ANGPT1	Q15389	498 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	TRIM16L	Q309B1	348 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	OR5M10	Q6IEU7	315 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	RPTN	Q6XPR3	784 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	PLEKHG7	Q6ZR37	379 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	HIST3H2A	Q7L7L0	130 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	OR6K6	Q8NGW6	343 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	OR6S1	Q8NH40	331 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	SLC22A8	Q8TCC7	542 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	RPS4Y2	Q8TD47	263 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	TMEM234	Q8WY98	164 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	HIST1H2AC	Q93077	130 aa		10.41	□□□□□ -0.74
RAB5C-208	ENST00000551338	PELI1	Q96FA3	418 aa		10.41	□□□□□ -0.74

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