RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 H1FNTQ75WM6 255 aaPredicted RBP9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 EPHX4Q8IUS5 362 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 FUNDC1Q8IVP5 155 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 ADPRHL1Q8NDY3 354 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 OR1K1Q8NGR3 316 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 TSPEARQ8WU66 669 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLC25A36Q96CQ1 311 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 SIKE1Q9BRV8 207 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 MRGBPQ9NV56 204 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLC25A37Q9NYZ2 338 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 TESQ9UGI8 421 aaKnown RBP9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 TRIM33Q9UPN9 1127 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 CORINQ9Y5Q5 1042 aa9.52□□□□□ -0.89
VTI1BP3-201ENST00000550220 A0A1B0GWA3 101 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 RPL36A-HNRNPH2H7BZ11 118 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 CD5LO43866 347 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLC25A16P16260 332 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 CDH2P19022 906 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 RPS5P46782 204 aaKnown RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SELENOPP49908 381 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 EFNA4P52798 201 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 FOXG1P55316 489 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 EGR4Q05215 589 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 RBBP4Q09028 425 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SCARB2Q14108 478 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 TBRG1Q3YBR2 411 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 AGKQ53H12 422 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 ALG10BQ5I7T1 473 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 RANBP3LQ86VV4 465 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SNX32Q86XE0 403 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLC30A8Q8IWU4 369 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 GPR137CQ8N3F9 429 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 HIPK4Q8NE63 616 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 PIK3C3Q8NEB9 887 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 IL17RDQ8NFM7 739 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 OR10H5Q8NGA6 315 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 OR4F15Q8NGB8 312 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 NFKBIDQ8NI38 313 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 PROX1Q92786 737 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 BCL2L2Q92843 193 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 KTI12Q96EK9 354 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLC38A2Q96QD8 506 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 EBF4Q9BQW3 602 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 KATNB1Q9BVA0 655 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 PTDSS2Q9BVG9 487 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLCO1B3Q9NPD5 702 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 LEF1Q9UJU2 399 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 GDF2Q9UK05 429 aaPredicted RBP9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 ANGPT4Q9Y264 503 aa9.51□□□□□ -0.89
VTI1BP3-201ENST00000550220 PLCE1Q9P212 2302 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 A0A087WUJ7 227 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 TRBV5-3A0A0A0MS03 114 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 FMO6PO60774 539 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 NDUFS7O75251 213 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 PDE5AO76074 875 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 LGI1O95970 557 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 IFNA2P01563 188 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 C8BP07358 591 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 ARR3P36575 388 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 SERPINF1P36955 418 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 CLDN17P56750 224 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 RGS8P57771 180 aaPredicted RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 SNRPD2P62316 118 aaKnown RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 HOXC5Q00444 222 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 LOXL1Q08397 574 aaPredicted RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 SPOCK1Q08629 439 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 HIKESHIQ53FT3 197 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 PAGE3Q5JUK9 113 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 HDXQ7Z353 690 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 ARMC8Q8IUR7 673 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 MSRB3Q8IXL7 192 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 DPP10Q8N608 796 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 SCAIQ8N9R8 606 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 C11orf65Q8NCR3 313 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 FAM168AQ92567 244 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 TAAR8Q969N4 342 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 LRR1Q96L50 414 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 MAGEB18Q96M61 343 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 ASPNQ9BXN1 380 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 VIPAS39Q9H9C1 493 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 MYOZ1Q9NP98 299 aaPredicted RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 B3GAT2Q9NPZ5 323 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLC52A3Q9NQ40 469 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 ARGLU1Q9NWB6 273 aaPredicted RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 VAPAQ9P0L0 249 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 SLAMF8Q9P0V8 285 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 CRNNQ9UBG3 495 aaPredicted RBP9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 MOKQ9UQ07 419 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 NDUFAF1Q9Y375 327 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 FKBP7Q9Y680 259 aa9.5□□□□□ -0.89
VTI1BP3-201ENST00000550220 A0A0B4J2E0 115 aa9.49□□□□□ -0.89
VTI1BP3-201ENST00000550220 A0A1B0GX12 115 aa9.49□□□□□ -0.89
VTI1BP3-201ENST00000550220 B9A039 149 aa9.49□□□□□ -0.89
VTI1BP3-201ENST00000550220 ATP6V1G2-DDX39BF2Z307 99 aa9.49□□□□□ -0.89
VTI1BP3-201ENST00000550220 NDUFS8O00217 210 aa9.49□□□□□ -0.89
VTI1BP3-201ENST00000550220 ANGPT2O15123 496 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms