RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 OR4C11Q6IEV9 310 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 COX15Q7KZN9 410 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 C5orf24Q7Z6I8 188 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 OR4N5Q8IXE1 308 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RNF113BQ8IZP6 322 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 TBC1D19Q8N5T2 526 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 CT55Q8WUE5 264 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 CKAP2Q8WWK9 683 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TM4SF19Q96DZ7 209 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 CNDP1Q96KN2 507 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ZNF285Q96NJ3 590 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PSD2Q9BQI7 771 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 CAPS2Q9BXY5 557 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 EHD1Q9H4M9 534 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 FGFR1OP2Q9NVK5 253 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 AMDHD2Q9Y303 409 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 NEUROG3Q9Y4Z2 214 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PKD1L2Q7Z442 2459 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 DSPP15924 2871 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 IGHV3-20A0A0C4DH32 117 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 A0A1B0GX78 115 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 GAGE12JA6NER3 117 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 H0YIV9 168 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ZNHIT1O43257 154 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ATP8B1O43520 1251 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 CHST10O43529 356 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 SRPX2O60687 465 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 SNNO75324 88 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 LRATO95237 230 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 KRT6AP02538 564 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 KRT6BP04259 564 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TCN2P20062 427 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 FBLP22087 321 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 PPP2R1BP30154 601 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RORAP35398 523 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 AHRP35869 848 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 XCR1P46094 333 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 KRT6CP48668 564 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RPL38P63173 70 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 EIF3IQ13347 325 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 IMPG1Q17R60 797 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 UGT3A2Q3SY77 523 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ANKRD26P1Q6NSI1 321 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 COMMD6Q7Z4G1 85 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 LRRC34Q8IZ02 419 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ZNF441Q8N8Z8 693 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PAPD5Q8NDF8 572 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 TRPV3Q8NET8 790 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TMEM185AQ8NFB2 350 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 THAP6Q8TBB0 222 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TSLPQ969D9 159 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 C8orf44Q96CB5 159 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RBM18Q96H35 190 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 MAPKAP1Q9BPZ7 522 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 EBF4Q9BQW3 602 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 DDA1Q9BW61 102 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ZNF717Q9BY31 904 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 ANKHQ9HCJ1 492 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TEX10Q9NXF1 929 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 SLCO1C1Q9NYB5 712 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 SNX6Q9UNH7 406 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 DLGAP4Q9Y2H0 992 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 CCDC88CQ9P219 2028 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ZFYVE26Q68DK2 2539 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PTPRQQ9UMZ3 2332 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 MGAQ8IWI9 3026 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 SRRM3A6NNA2 597 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 A8MUA0 341 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TMEM114B3SHH9 223 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 E9PI62 339 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 F8VVB4 439 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 F8VWA3 439 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 NVLO15381 856 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 GALR3O60755 368 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 SERPINA6P08185 405 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 IRF2P14316 349 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 LIFP15018 202 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ATP5A1P25705 553 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 DLSTP36957 453 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 AMTP48728 403 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RPL14P50914 215 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 BTG2P78543 158 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 SRSF7Q16629 238 aaKnown RBP eCLIP3.35□□□□□ -1.87
APAF1-208ENST00000549007 GGTA1PQ4G0N0 100 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RHBDD2Q6NTF9 364 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TRIM40Q6P9F5 258 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 Q6ZSR9 355 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 LANCL3Q6ZV70 420 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ASB18Q6ZVZ8 466 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ERASQ7Z444 233 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 NUDT13Q86X67 352 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 MEX3DQ86XN8 651 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 BATF2Q8N1L9 274 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ACOT4Q8N9L9 421 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 OR2L5Q8NG80 312 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 NT5CQ8TCD5 201 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TMEM255BQ8WV15 326 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 UBE2E3Q969T4 207 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms