RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 HSFY1Q96LI6 401 aa2.49□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF641Q96N77 438 aaPredicted RBP2.49□□□□□ -2.01
CNOT2-216ENST00000548939 UTP23Q9BRU9 249 aaKnown RBP2.49□□□□□ -2.01
CNOT2-216ENST00000548939 ZYG11BQ9C0D3 744 aa2.49□□□□□ -2.01
CNOT2-216ENST00000548939 OR2AG1Q9H205 316 aa2.49□□□□□ -2.01
CNOT2-216ENST00000548939 ABCG8Q9H221 673 aa2.49□□□□□ -2.01
CNOT2-216ENST00000548939 MRM3Q9HC36 420 aaKnown RBP2.49□□□□□ -2.01
CNOT2-216ENST00000548939 UBE2TQ9NPD8 197 aaPredicted RBP2.49□□□□□ -2.01
CNOT2-216ENST00000548939 IMP3Q9NV31 184 aaKnown RBP2.49□□□□□ -2.01
CNOT2-216ENST00000548939 MFHAS1Q9Y4C4 1052 aa2.49□□□□□ -2.01
CNOT2-216ENST00000548939 ANKRD12Q6UB98 2062 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 CADP27708 2225 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PCM1Q15154 2024 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 LOC100653049A0A140TA62 436 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 FAM170AA1A519 330 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 TSPAN11A1L157 253 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 TMCO5BA8MYB1 307 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 EEF1E1-BLOC1S5C9J1V9 151 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 KRTAP4-16G5E9R7 235 aaPredicted RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 EEF1E1O43324 174 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 KDELR3O43731 214 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PRAF2O60831 178 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 KRT34O76011 436 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 SOD1P00441 154 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 IGLV3-25P01717 112 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 IGHG3P01860 377 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 SERPINA7P05543 415 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 ALOX5P09917 674 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 OR9G9P0C7N8 305 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 KRT13P13646 458 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 HLA-DPA1P20036 260 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 MDKP21741 143 aaPredicted RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 LONP1P36776 959 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 SULT1E1P49888 294 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 KPNA2P52292 529 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 YWHAEP62258 255 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 CXCL6P80162 114 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 XRCC4Q13426 336 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 ACKR1Q16570 336 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF789Q5FWF6 425 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 TXNRD3NBQ6F5E7 133 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 RHBDD2Q6NTF9 364 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 SLC27A4Q6P1M0 643 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 RFLNAQ6ZTI6 216 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 RFPL4BQ6ZWI9 263 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 NDUFAF7Q7L592 441 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 STRADAQ7RTN6 431 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 LRRC17Q8N6Y2 441 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 SAMD12Q8N8I0 201 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 OR4E2Q8NGC2 313 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 SMPDL3AQ92484 453 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PSMF1Q92530 271 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 FAM104AQ969W3 186 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PIK3IP1Q96FE7 263 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 EPSTI1Q96J88 318 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 TTYH2Q9BSA4 534 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 RIOK2Q9BVS4 552 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 RAB33BQ9H082 229 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 DEFB127Q9H1M4 99 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 CLSTN2Q9H4D0 955 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 THAP9Q9H5L6 903 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PNPLA3Q9NST1 481 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PIGVQ9NUD9 493 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 C6orf203Q9P0P8 240 aaPredicted RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 VPS18Q9P253 973 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 LHX3Q9UBR4 397 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 CTSFQ9UBX1 484 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 MTRF1LQ9UGC7 380 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 C3orf18Q9UK00 162 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 PSMD13Q9UNM6 376 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 RUVBL2Q9Y230 463 aaKnown RBP2.48□□□□□ -2.01
CNOT2-216ENST00000548939 AP1M2Q9Y6Q5 423 aa2.48□□□□□ -2.01
CNOT2-216ENST00000548939 DSCAMO60469 2012 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 CCT8L1PA6NM43 557 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF732B4DXR9 585 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 KLRC4-KLRK1H3BQV0 150 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 SAP18O00422 153 aaKnown RBP2.47□□□□□ -2.01
CNOT2-216ENST00000548939 KMOO15229 486 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 HSF2BPO75031 334 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 MTX2O75431 263 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 COX6A1P12074 109 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF7P17097 686 aaPredicted RBP2.47□□□□□ -2.01
CNOT2-216ENST00000548939 VCLP18206 1134 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 DPP4P27487 766 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 TEAD1P28347 426 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 PBLDP30039 288 aaPredicted RBP2.47□□□□□ -2.01
CNOT2-216ENST00000548939 GTF2H1P32780 548 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 SRP14P37108 136 aaKnown RBP2.47□□□□□ -2.01
CNOT2-216ENST00000548939 SLC1A3P43003 542 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 OR1D4P47884 311 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 SNRPFP62306 86 aaKnown RBP2.47□□□□□ -2.01
CNOT2-216ENST00000548939 CUL2Q13617 745 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 RASA2Q15283 850 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 CYTH1Q15438 398 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 BRMS1LQ5PSV4 323 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 ACER2Q5QJU3 275 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 FAM120AOSQ5T036 256 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 LRRC66Q68CR7 880 aa2.47□□□□□ -2.01
CNOT2-216ENST00000548939 SLC25A25Q6KCM7 469 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms