RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 C2CD4DB7Z1M9 353 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 SLC25A12O75746 678 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 SPARCP09486 303 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 TMIGD3P0DMS9 266 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 NANOS3P60323 173 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 POU4F3Q15319 338 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM184AQ6ZMB5 413 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF550Q7Z398 422 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 GPR119Q8TDV5 335 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 ATOH1Q92858 354 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 OR11A1Q9GZK7 315 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 GMDSO60547 372 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 PRAMEF2O60811 474 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CT45A8P0DMV1 189 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CT45A9P0DMV2 189 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 EPXP11678 715 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 IL12BP29460 328 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CLDN20P56880 219 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 NRG3P56975 720 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 FBXW4P57775 412 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 MELKQ14680 651 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CEBPEQ15744 281 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CT45A2Q5DJT8 189 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM69Q5SWH9 247 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 LIPNQ5VXI9 398 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 APOOLQ6UXV4 268 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 MRGPREQ86SM8 312 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 PM20D2Q8IYS1 436 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 STACQ99469 402 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 DMDP11532 3685 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 SPTY2D1-AS1A0A0U1RR47 76 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 ARPC1BO15143 372 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 FOXS1O43638 330 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 NKX2-2O95096 273 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 LIPCP11150 499 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 SRMP19623 302 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CXCR1P25024 350 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CCKBRP32239 447 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 GALK2Q01415 458 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 CDK5R1Q15078 307 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 SIX5Q8N196 739 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 BMPERQ8N8U9 685 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 TBL1XR1Q9BZK7 514 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM138Q9NPI0 162 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 MKL2Q9ULH7 1088 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 KLHDC2Q9Y2U9 406 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
PRPF40B-209ENST00000548825 PRR32B1ATL7 298 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 H2AFB2P0C5Z0 115 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 DRD1P21728 446 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 CD1CP29017 333 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 ERP29P30040 261 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 GZMKP49863 264 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 HTR4Q13639 388 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 FAM69BQ5VUD6 431 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 TMPRSS9Q7Z410 1059 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 MS4A15Q8N5U1 240 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 DVL3Q92997 716 aaPredicted RBP12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 SARGQ9BW04 601 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 C14orf105Q9NVL8 296 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 XKRYO14609 159 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 PLPP2O43688 288 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 PTP4A3O75365 173 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 SCO1O75880 301 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 WISP1O95388 367 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 SIX6O95475 246 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 GPR143P51810 404 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 OR1D5P58170 312 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 ETFDHQ16134 617 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 PYHIN1Q6K0P9 492 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 C11orf88Q6PI97 169 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 C3orf49Q96BT1 292 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 VSTM2LQ96N03 204 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 METTL17Q9H7H0 456 aaPredicted RBP12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 CENPMQ9NSP4 180 aa12.48□□□□□ -0.41
PRPF40B-209ENST00000548825 NPR2P20594 1047 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 DCTDP32321 178 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 TAS2R43P59537 309 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 RPS15P62841 145 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ACTC1P68032 377 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ACTA1P68133 377 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ARHGAP40Q5TG30 622 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 RPL13AP3Q6NVV1 102 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms