RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SH3BGRP55822 239 aaPredicted RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 LTBQ06643 244 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 C1DQ13901 141 aaKnown RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 NFYCQ13952 458 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 CYLC2Q14093 348 aaPredicted RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 NRF1Q16656 503 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 INTS11Q5TA45 600 aaKnown RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 ZNF544Q6NX49 715 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 H1FNTQ75WM6 255 aaPredicted RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 DTX2Q86UW9 622 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 EPHX4Q8IUS5 362 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 FBXL14Q8N1E6 418 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 C10orf111Q8N326 155 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 WDR31Q8NA23 367 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 RASSF5Q8WWW0 418 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 NEUROG1Q92886 237 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 KTI12Q96EK9 354 aaPredicted RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 THOC1Q96FV9 657 aaKnown RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 ADAD1Q96M93 576 aaKnown RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 CGREF1Q99674 301 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 CPPED1Q9BRF8 314 aaPredicted RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 TRAF4Q9BUZ4 470 aaPredicted RBP9.99□□□□□ -0.81
BEST3-209ENST00000548658 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 IKZF5Q9H5V7 419 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 ZNF385DQ9H6B1 395 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 VPS13CQ709C8 3753 aa9.99□□□□□ -0.81
BEST3-209ENST00000548658 A0A0B4J2E0 115 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 A0A1B0GX12 115 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 A0A1W2PR80 420 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 TRIM64A6NGJ6 449 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 TRIM64BA6NI03 449 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 M0QX08 132 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 NPPAP01160 153 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 CDH2P19022 906 aaPredicted RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 HTR2AP28223 471 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 AQP1P29972 269 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 FOXG1P55316 489 aaPredicted RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 PCBP3P57721 371 aaKnown RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 UBE2NP61088 152 aaKnown RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 OR1Q1Q15612 314 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 CLEC12BQ2HXU8 276 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 C9orf135Q5VTT2 229 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 HMBOX1Q6NT76 420 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 NIPAL3Q6P499 406 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 ZNF613Q6PF04 617 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 PATL1Q86TB9 770 aaKnown RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 CIARTQ8N365 385 aaPredicted RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 MUC15Q8N387 334 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 SCAIQ8N9R8 606 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 ADPRHL1Q8NDY3 354 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 RNF217Q8TC41 542 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 MAGEE2Q8TD90 523 aaPredicted RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 SLC26A7Q8TE54 656 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 TAAR8Q969N4 342 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 HS6ST2Q96MM7 605 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 SMR3AQ99954 134 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 ASPNQ9BXN1 380 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 KAT8Q9H7Z6 458 aaKnown RBP9.98□□□□□ -0.81
BEST3-209ENST00000548658 CBLN4Q9NTU7 201 aa9.98□□□□□ -0.81
BEST3-209ENST00000548658 HEATR1Q9H583 2144 aaKnown RBP9.97□□□□□ -0.81
BEST3-209ENST00000548658 E7EQL1 145 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 RPL36A-HNRNPH2H7BZ11 118 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 M0R082 166 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
BEST3-209ENST00000548658 SLC43A1O75387 559 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 LY6G6DO95868 133 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 LGI1O95970 557 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 MT-ATP6P00846 226 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 CD8AP01732 235 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 NQO1P15559 274 aaKnown RBP9.97□□□□□ -0.81
BEST3-209ENST00000548658 HOXB4P17483 251 aaPredicted RBP9.97□□□□□ -0.81
BEST3-209ENST00000548658 GRPRP30550 384 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 CDKN1AP38936 164 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 SELENOPP49908 381 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 FABP6P51161 128 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 CLDN17P56750 224 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 MTPNP58546 118 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 CHRNB3Q05901 458 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 DMTNQ08495 405 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 VEZF1Q14119 521 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 MAPRE2Q15555 327 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 C3orf36Q3SXR2 165 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 ANKRD16Q6P6B7 361 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 PTOV1Q86YD1 416 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 UEVLDQ8IX04 471 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 CCDC36Q8IYA8 594 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 KDM8Q8N371 416 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 GPR137CQ8N3F9 429 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 FAM169BQ8N8A8 192 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 PIK3C3Q8NEB9 887 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 OR1K1Q8NGR3 316 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 ZNF417Q8TAU3 575 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 ZNF587Q96SQ5 575 aaPredicted RBP9.97□□□□□ -0.81
BEST3-209ENST00000548658 KCNS3Q9BQ31 491 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 TMEM43Q9BTV4 400 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 C1QTNF6Q9BXI9 259 aa9.97□□□□□ -0.81
BEST3-209ENST00000548658 ARPC4-TTLL3A0A0A6YYG9 625 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms