RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TMEM160Q9NX00 188 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 RPS6KB2Q9UBS0 482 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 ZNF232Q9UNY5 417 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 CHST2Q9Y4C5 530 aa17.71■□□□□ 0.43
SSH1-207ENST00000547862 VWC2LB2RUY7 222 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 NUDT7P0C024 238 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 CBLP22681 906 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 CAPZA2P47755 286 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 ADIPOQQ15848 244 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 MAL2Q969L2 176 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 MSI2Q96DH6 328 aaKnown RBP17.7■□□□□ 0.42
SSH1-207ENST00000547862 BPESC1Q9GZL8 116 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 PIF1Q9H611 641 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 ARMC7Q9H6L4 198 aa17.7■□□□□ 0.42
SSH1-207ENST00000547862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.69■□□□□ 0.42
SSH1-207ENST00000547862 A0A096LPI6 279 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 ARPC4-TTLL3A0A0A6YYG9 625 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 NDUFS8O00217 210 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 SNNO75324 88 aaPredicted RBP17.69■□□□□ 0.42
SSH1-207ENST00000547862 VAMP5O95183 116 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 ZNF43P17038 809 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 ARF1P84077 181 aaKnown RBP17.69■□□□□ 0.42
SSH1-207ENST00000547862 TNFAIP8L3Q5GJ75 292 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 FAM120AOSQ5T036 256 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 ANKRD16Q6P6B7 361 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 MAVSQ7Z434 540 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 GPR137CQ8N3F9 429 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 RNF217Q8TC41 542 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 STK35Q8TDR2 534 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 KTI12Q96EK9 354 aaPredicted RBP17.69■□□□□ 0.42
SSH1-207ENST00000547862 OR52B2Q96RD2 323 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 PTDSS2Q9BVG9 487 aa17.69■□□□□ 0.42
SSH1-207ENST00000547862 A0A0G2JPF8 293 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 HNRNPCL2B2RXH8 293 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 HNRNPCL3B7ZW38 293 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 B9A039 149 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 C5orf58C9J3I9 102 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 hCG_2039718K7EN88 272 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 HNRNPCL1O60812 293 aaKnown RBP17.68■□□□□ 0.42
SSH1-207ENST00000547862 NPIPB7O75200 414 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 SLC43A1O75387 559 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 HNRNPCL4P0DMR1 293 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 HNF1AP20823 631 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 POLR2JP52435 117 aaKnown RBP17.68■□□□□ 0.42
SSH1-207ENST00000547862 C1DQ13901 141 aaKnown RBP17.68■□□□□ 0.42
SSH1-207ENST00000547862 C1QTNF12Q5T7M4 302 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 CARD17Q5XLA6 110 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 SLC2A7Q6PXP3 512 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 SVOPLQ8N434 492 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 MFSD8Q8NHS3 518 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 ZIM2Q9NZV7 527 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 IFT52Q9Y366 437 aa17.68■□□□□ 0.42
SSH1-207ENST00000547862 LOC390937A0A1W2PQ73 354 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 SH3PXD2BA1X283 911 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 LRP5LA4QPB2 252 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 OR6C65A6NJZ3 312 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 FTCDNL1E5RQL4 147 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 M0R082 166 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 UBDO15205 165 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 ZCCHC18P0CG32 403 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 SH3BGRP55822 239 aaPredicted RBP17.67■□□□□ 0.42
SSH1-207ENST00000547862 EGR4Q05215 589 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 CEACAM16Q2WEN9 425 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 SPATA21Q7Z572 469 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 ZNF417Q8TAU3 575 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 ZNF587Q96SQ5 575 aaPredicted RBP17.67■□□□□ 0.42
SSH1-207ENST00000547862 C19orf24Q9BVV8 132 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 LINC00470Q9BZP3 86 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 DYNLRB1Q9NP97 96 aa17.67■□□□□ 0.42
SSH1-207ENST00000547862 MYOZ1Q9NP98 299 aaPredicted RBP17.67■□□□□ 0.42
SSH1-207ENST00000547862 CRNNQ9UBG3 495 aaPredicted RBP17.67■□□□□ 0.42
SSH1-207ENST00000547862 ZNF503-AS2A6NEH8 195 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 SLCO1B7G3V0H7 640 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 AIM2O14862 343 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 PDE5AO76074 875 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 TGFAP01135 160 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 IGLV1-44P01699 117 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 THBS4P35443 961 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 PPOXP50336 477 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 RGNQ15493 299 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 ZSWIM7Q19AV6 140 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 KRT80Q6KB66 452 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 MSANTD1Q6ZTZ1 278 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 ZCCHC24Q8N2G6 241 aaKnown RBP17.66■□□□□ 0.42
SSH1-207ENST00000547862 MIER2Q8N344 545 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 OR4F15Q8NGB8 312 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 NFKBIDQ8NI38 313 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 BBS10Q8TAM1 723 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 MAGEE2Q8TD90 523 aaPredicted RBP17.66■□□□□ 0.42
SSH1-207ENST00000547862 ZNF837Q96EG3 531 aaPredicted RBP17.66■□□□□ 0.42
SSH1-207ENST00000547862 BOD1Q96IK1 185 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 MAELQ96JY0 434 aaKnown RBP17.66■□□□□ 0.42
SSH1-207ENST00000547862 SOX7Q9BT81 388 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 RAB1BQ9H0U4 201 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 PLK3Q9H4B4 646 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 GPR35Q9HC97 309 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 SDR39U1Q9NRG7 319 aaPredicted RBP17.66■□□□□ 0.42
SSH1-207ENST00000547862 THUMPD1Q9NXG2 353 aaKnown RBP17.66■□□□□ 0.42
SSH1-207ENST00000547862 B3GAT1Q9P2W7 334 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 RCE1Q9Y256 329 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms