RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 APOBEC4Q8WW27 367 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ARSGQ96EG1 525 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 RIOK2Q9BVS4 552 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 RHBGQ9H310 441 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 POFUT1Q9H488 388 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ABRACLQ9P1F3 81 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 B4GALT6Q9UBX8 382 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ZNF337Q9Y3M9 751 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 TRAV14DV4A0A0A6YYC5 116 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 C17orf113A0A1B0GUU1 675 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 CDHR4A6H8M9 788 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 C5orf51A6NDU8 294 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ZNF821O75541 412 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 GNRH1P01148 92 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 FAUP35544 74 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 PRKXP51817 358 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 POLR2LP62875 67 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 SHC2P98077 582 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 EFNB1P98172 346 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 OR8G1Q15617 311 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 MAPK14Q16539 360 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 RNF44Q7L0R7 432 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 C17orf64Q86WR6 236 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 CCDC116Q8IYX3 515 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ARL6IP6Q8N6S5 226 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 OR4A4PQ8NGN8 299 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ADAMTS15Q8TE58 950 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 ASB11Q8WXH4 323 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 FGF11Q92914 225 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 TMEM169Q96HH4 297 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 SOX7Q9BT81 388 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 HCAR1Q9BXC0 346 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 SEC11CQ9BY50 192 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 OPA3Q9H6K4 179 aa11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 MBD1Q9UIS9 605 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-208ENST00000547372 LAMA3Q16787 3333 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 GAPDHSO14556 408 aaPredicted RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 COCHO43405 550 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 BCL2L11O43521 198 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 RAB6AP20340 208 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 GJA4P35212 333 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 HTRA4P83105 476 aaPredicted RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 TAF1CQ15572 869 aaPredicted RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 PRSS53Q2L4Q9 553 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 TPRG1Q6ZUI0 275 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 OR4C6Q8NH72 309 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 NRIP2Q9BQI9 281 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 CRLF2Q9HC73 371 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 NPFFR2Q9Y5X5 522 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 TRBV2A0A0J9YWF9 115 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 KDM4EB2RXH2 506 aaPredicted RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 POP4O95707 220 aaKnown RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 MT-ND4LP03901 98 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 ITPKBP27987 946 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 HTR5AP47898 357 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 ID4P47928 161 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 PFN3P60673 137 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 TBPL1P62380 186 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 GPNMBQ14956 572 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 CDNFQ49AH0 187 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 UBE2NLQ5JXB2 153 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 AADACL4Q5VUY2 407 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 NKAIN4Q8IVV8 208 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 DTD1Q8TEA8 209 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 SERTM1A2A2V5 107 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 RNASEK-C17orf49H0YIS7 233 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 CLDN4O14493 209 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 F11P03951 625 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 PGAM2P15259 253 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 RAB5AP20339 215 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 GALP22466 123 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 VAMP1P23763 118 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 HTR1FP30939 366 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 ACSM1Q08AH1 577 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 ST3GAL3Q11203 375 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 ARL14Q8N4G2 192 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 OR2G2Q8NGZ5 317 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 SECTM1Q8WVN6 248 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 UBE2E3Q969T4 207 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 CPNE4Q96A23 557 aaPredicted RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 JSRP1Q96MG2 331 aaPredicted RBP11□□□□□ -0.65
RBFOX1-208ENST00000547372 RGCCQ9H4X1 137 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 SLC25A13Q9UJS0 675 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 FBXL4Q9UKA2 621 aa11□□□□□ -0.65
RBFOX1-208ENST00000547372 TRAPPC13A5PLN9 417 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 RIIAD1A6NNX1 92 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 SURF4O15260 269 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 EIF4E2O60573 245 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 FBXO24O75426 580 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 ITGA10O75578 1167 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 MED6O75586 246 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 ARL6IP5O75915 188 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 IL5P05113 134 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 EDNRAP25101 427 aa10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 ZNF772Q68DY9 489 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-208ENST00000547372 Q6ZVU0 165 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms