RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 H1FNTQ75WM6 255 aaPredicted RBP13.99□□□□□ -0.17
DDX54-204ENST00000546898 CPLX4Q7Z7G2 160 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 TREML1Q86YW5 311 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 EPHX4Q8IUS5 362 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 MICU2Q8IYU8 434 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 OR4D11Q8NGI4 311 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 SLC41A3Q96GZ6 507 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 MPP4Q96JB8 637 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 MUS81Q96NY9 551 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 OXGR1Q96P68 337 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 CCL19Q99731 98 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 HOPXQ9BPY8 73 aaPredicted RBP13.99□□□□□ -0.17
DDX54-204ENST00000546898 ASPNQ9BXN1 380 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 MYLK2Q9H1R3 596 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 EFCAB1Q9HAE3 211 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 USP22Q9UPT9 525 aa13.99□□□□□ -0.17
DDX54-204ENST00000546898 PLCE1Q9P212 2302 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 LOC102725191A0A1B0GVB3 256 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 GMNCA6NCL1 334 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 NDUFAB1O14561 156 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 TMCC2O75069 709 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 MT-ATP6P00846 226 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 BGLAPP02818 100 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 DRD4P21917 467 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 PRDX6P30041 224 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 LRRC23Q53EV4 343 aaPredicted RBP13.98□□□□□ -0.17
DDX54-204ENST00000546898 NIPAL3Q6P499 406 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 CARM1Q86X55 608 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 RBM45Q8IUH3 476 aaKnown RBP13.98□□□□□ -0.17
DDX54-204ENST00000546898 P3H2Q8IVL5 708 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 SLC15A3Q8IY34 581 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 LINC00470Q9BZP3 86 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 SLC19A3Q9BZV2 496 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 FAM107BQ9H098 131 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 CMTM6Q9NX76 183 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 MRPL39Q9NYK5 338 aaKnown RBP13.98□□□□□ -0.17
DDX54-204ENST00000546898 B3GAT1Q9P2W7 334 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 SEC14L4Q9UDX3 406 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 AMDHD2Q9Y303 409 aa13.98□□□□□ -0.17
DDX54-204ENST00000546898 HEATR1Q9H583 2144 aaKnown RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 ZNF587BE7ETH6 402 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 HS3ST1O14792 307 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 KRT33AO76009 404 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 LYPD3O95274 346 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 PLAUP00749 431 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 HOXC12P31275 282 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 KDELR2P33947 212 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 SELENOPP49908 381 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 FOXG1P55316 489 aaPredicted RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 CLDN17P56750 224 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 BSPH1Q075Z2 132 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 C1DQ13901 141 aaKnown RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 C8orf82Q6P1X6 216 aaPredicted RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 TTC33Q6PID6 262 aaPredicted RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 LRRC75A-AS1Q8N1F1 130 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 KDM8Q8N371 416 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 ZNF611Q8N823 705 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 BOD1Q96IK1 185 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 ZNF426Q9BUY5 554 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 SLC7A7Q9UM01 511 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 SH3GLB1Q9Y371 365 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 MAGED1Q9Y5V3 778 aaPredicted RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 SLC25A15Q9Y619 301 aa13.97□□□□□ -0.17
DDX54-204ENST00000546898 FLNAP21333 2647 aaKnown RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 MAP1AP78559 2803 aaPredicted RBP13.97□□□□□ -0.17
DDX54-204ENST00000546898 DPRXA6NFQ7 191 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 CLOCKO15516 846 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 TRAF3IP2O43734 574 aaPredicted RBP13.96□□□□□ -0.17
DDX54-204ENST00000546898 SLC43A1O75387 559 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 THY1P04216 161 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 NUDT2P50583 147 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 SLC7A2P52569 658 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 GNGT1P63211 74 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 IL1RL1Q01638 556 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 LIPEQ05469 1076 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 LTBQ06643 244 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 PUDPQ08623 228 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 CYBRD1Q53TN4 286 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 KLHL17Q6TDP4 642 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 TMEM108Q6UXF1 575 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 TSPYL5Q86VY4 417 aaPredicted RBP13.96□□□□□ -0.17
DDX54-204ENST00000546898 UEVLDQ8IX04 471 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 C10orf53Q8N6V4 93 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 ANKK1Q8NFD2 765 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 OR52N5Q8NH56 324 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 LZICQ8WZA0 190 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 AKAP1Q92667 903 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX54-204ENST00000546898 MOGAT1Q96PD6 335 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 ALKBH3Q96Q83 286 aaPredicted RBP13.96□□□□□ -0.17
DDX54-204ENST00000546898 ALG2Q9H553 416 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 SLC17A5Q9NRA2 495 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 NPAP1Q9NZP6 1156 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 MGAT4BQ9UQ53 548 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 NOX1Q9Y5S8 564 aa13.96□□□□□ -0.17
DDX54-204ENST00000546898 MS4A18H0YCH9 400 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 NME4O00746 187 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 DYNC1I1O14576 645 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 SMPD2O60906 423 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms