RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 BEX5Q5H9J7 111 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 TXNDC8Q6A555 127 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ANKRD16Q6P6B7 361 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 UNQ6126/PRO20091Q6UXV3 157 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 OR14L1PQ8NHC6 308 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 FAM213BQ8TBF2 198 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 IRF7Q92985 503 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 TOMM40LQ969M1 308 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 BORCS7Q96B45 105 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 NOX4Q9NPH5 578 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 CLEC2DQ9UHP7 191 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 PURGQ9UJV8 347 aaKnown RBP11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 B4GALT2O60909 372 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ETV5P41161 510 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 EIF2B1Q14232 305 aaKnown RBP11.89□□□□□ -0.51
PTCH1-212ENST00000546744 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 TRAPPC6BQ86SZ2 158 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 FRMD1Q8N878 549 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 OR9K2Q8NGE7 335 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 OR51L1Q8NGJ5 315 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 SPTSSAQ969W0 71 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 TMEM106AQ96A25 262 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ZCCHC4Q9H5U6 513 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 NARFLQ9H6Q4 476 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 PARPBPQ9NWS1 579 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 A8MUA0 341 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 BHLHE40O14503 412 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 HOXB5P09067 269 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF44P15621 663 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 FLT3LGP49771 235 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 SCAND1P57086 179 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 UBE2IP63279 158 aaKnown RBP11.89□□□□□ -0.51
PTCH1-212ENST00000546744 MRPL49Q13405 166 aaKnown RBP11.89□□□□□ -0.51
PTCH1-212ENST00000546744 CNN3Q15417 329 aaKnown RBP11.89□□□□□ -0.51
PTCH1-212ENST00000546744 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
PTCH1-212ENST00000546744 OR5M8Q8NGP6 311 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 OR7D2Q96RA2 312 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 FZD3Q9NPG1 666 aa11.89□□□□□ -0.51
PTCH1-212ENST00000546744 OR5H14A6NHG9 310 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 FAM183AA6NL82 134 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 HIDE1A8MVS5 230 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 STK17BO94768 372 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 HOXA11P31270 313 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ALKBH1Q13686 389 aaKnown RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 OR1Q1Q15612 314 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 FIGNL1Q6PIW4 674 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 PRSS35Q8N3Z0 413 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 GALNT16Q8N428 558 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 STT3BQ8TCJ2 826 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ST6GAL2Q96JF0 529 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 EHFQ9NZC4 300 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 LRP5LA4QPB2 252 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 J3KTA2 159 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SNAI1O95863 264 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 MC3RP41968 323 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 OC90Q02509 493 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 CCL14Q16627 93 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ZC3H14Q6PJT7 736 aaKnown RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF705AQ6ZN79 300 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 DPY19L4Q7Z388 723 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 METTL7AQ9H8H3 244 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ELOVL2Q9NXB9 296 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 CACNG4Q9UBN1 327 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 IL20RAQ9UHF4 553 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 KCNK6Q9Y257 313 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 CFAP20Q9Y6A4 193 aaKnown RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 A0A1B0GV50 99 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 H3BSH0 61 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 GJA1P17302 382 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 PSMB10P40306 273 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 KCNJ10P78508 379 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SP3Q02447 781 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 PLCXD2Q0VAA5 305 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF239Q16600 458 aaKnown RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 FAM162BQ5T6X4 162 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 WBP2NLQ6ICG8 309 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SCD5Q86SK9 330 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 WDR5BQ86VZ2 330 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SLAMF9Q96A28 289 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 UBQLN3Q9H347 655 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 A0A1W2PRU2 124 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 TMEM189-UBE2V1I3L0A0 370 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 CYTIPO60759 359 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 PRSS23O95084 383 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 FBXO45P0C2W1 286 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 PRSS56P0CW18 603 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 HIST1H1TP22492 207 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ARL3P36405 182 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms