RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 GPAT4Q86UL3 456 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 ZIC4Q8N9L1 334 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 OR5J2Q8NH18 312 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 ZNF385AQ96PM9 386 aaKnown RBP14.49□□□□□ -0.09
LIMS2-217ENST00000545738 NIPSNAP1Q9BPW8 284 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 PRRG4Q9BZD6 226 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 RASSF4Q9H2L5 321 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 MCCC2Q9HCC0 563 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 RNF6Q9Y252 685 aa14.49□□□□□ -0.09
LIMS2-217ENST00000545738 J3QKU1 62 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 GNGT2O14610 69 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 EIF1BO60739 113 aaKnown RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 ZG16O60844 167 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 DEAF1O75398 565 aaPredicted RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 CCNB2O95067 398 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 LDLRP01130 860 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 SAGP10523 405 aaPredicted RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 HOXB6P17509 224 aaKnown RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 AGTR1P30556 359 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 DNAJA1P31689 397 aaKnown RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 AQP2P41181 271 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 RPL18Q07020 188 aaKnown RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 ZFP1Q6P2D0 407 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 MAMDC2Q7Z304 686 aaPredicted RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 NUFIP2Q7Z417 695 aaKnown RBP14.48□□□□□ -0.09
LIMS2-217ENST00000545738 SCAIQ8N9R8 606 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 AQP11Q8NBQ7 271 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 OR10G2Q8NGC3 310 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 OR51A7Q8NH64 312 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 PIGXQ8TBF5 258 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 TNFRSF13CQ96RJ3 184 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 BCO1Q9HAY6 547 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 IL20RAQ9UHF4 553 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 B3GALT5Q9Y2C3 310 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 CORINQ9Y5Q5 1042 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 FLVCR1Q9Y5Y0 555 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 CACNA1CQ13936 2221 aa14.48□□□□□ -0.09
LIMS2-217ENST00000545738 IGKV3D-15A0A087WSY6 115 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 A0A1W2PNV4 684 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 EFCAB9A8MZ26 197 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 C11orf98E9PRG8 122 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 BLOC1S5-TXNDC5H3BN57 136 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 TRAF3IP2O43734 574 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 SS18L1O75177 396 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 TP53P04637 393 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 IGFBP1P08833 259 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 GSSP48637 474 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 GTF2A1P52655 376 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 SLC16A1P53985 500 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 SIRPAP78324 504 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 PMS2P3Q13401 168 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 RIPPLY2Q5TAB7 128 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 THSD4Q6ZMP0 1018 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 KIF18BQ86Y91 864 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 LRRC75AQ8NAA5 344 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 RELL2Q8NC24 303 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 OR9K2Q8NGE7 335 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 FEVQ99581 238 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 TM9SF2Q99805 663 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 PDP1Q9P0J1 537 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 C6orf203Q9P0P8 240 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-217ENST00000545738 TMCC3Q9ULS5 477 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 OAZ3Q9UMX2 235 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 SIGLEC7Q9Y286 467 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 HIF3AQ9Y2N7 669 aa14.47□□□□□ -0.09
LIMS2-217ENST00000545738 A0A1B0GUH1 482 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 PTP4A3O75365 173 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 E2F6O75461 281 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 PLGP00747 810 aaPredicted RBP14.46□□□□□ -0.09
LIMS2-217ENST00000545738 IL2RAP01589 272 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 F13BP05160 661 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 ADORA3P0DMS8 318 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 TMIGD3P0DMS9 266 aaPredicted RBP14.46□□□□□ -0.09
LIMS2-217ENST00000545738 FCGR2AP12318 317 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 GTF2E2P29084 291 aaKnown RBP14.46□□□□□ -0.09
LIMS2-217ENST00000545738 PUDPQ08623 228 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 MFSD13AQ14CX5 517 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 SHQ1Q6PI26 577 aaKnown RBP14.46□□□□□ -0.09
LIMS2-217ENST00000545738 RRM2BQ7LG56 351 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 IGFN1Q86VF2 1251 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 SLC43A2Q8N370 569 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 ADPRHL1Q8NDY3 354 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 GTPBP3Q969Y2 492 aaKnown RBP14.46□□□□□ -0.09
LIMS2-217ENST00000545738 STARD4Q96DR4 205 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 ZHX1-C8orf76Q96EF9 292 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 GMPPAQ96IJ6 420 aaPredicted RBP14.46□□□□□ -0.09
LIMS2-217ENST00000545738 ASPNQ9BXN1 380 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 FANCFQ9NPI8 374 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 SLC5A6Q9Y289 635 aa14.46□□□□□ -0.09
LIMS2-217ENST00000545738 PDLIM1O00151 329 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 SERPINI2O75830 405 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 CGAP01215 116 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 FPR3P25089 353 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 PER3P56645 1201 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 RNPS1Q15287 305 aaKnown RBP14.46□□□□□ -0.1
LIMS2-217ENST00000545738 SF3B4Q15427 424 aaKnown RBP eCLIP14.46□□□□□ -0.1
LIMS2-217ENST00000545738 TMEM225Q6GV28 225 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 CREB3L2Q70SY1 520 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 FAM214BQ7L5A3 538 aa14.46□□□□□ -0.1
LIMS2-217ENST00000545738 NANOGNBQ7Z5D8 188 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms