RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	PTH2R	P49190	550 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	CRYBA2	P53672	197 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	RPS4X	P62701	263 aa	Known RBP	11.76	□□□□□ -0.53
POLE-222	ENST00000545015	VEZF1	Q14119	521 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	NPTX1	Q15818	432 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	KLHL17	Q6TDP4	642 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	H1FNT	Q75WM6	255 aa	Predicted RBP	11.76	□□□□□ -0.53
POLE-222	ENST00000545015	DTX2	Q86UW9	622 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	SCAI	Q8N9R8	606 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	SMYD1	Q8NB12	490 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.76	□□□□□ -0.53
POLE-222	ENST00000545015	TAMM41	Q96BW9	452 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	SLC25A36	Q96CQ1	311 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	C18orf12	Q96KH6	178 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	OXGR1	Q96P68	337 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	PRR14	Q9BWN1	585 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	SELENON	Q9NZV5	590 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.76	□□□□□ -0.53
POLE-222	ENST00000545015	ARID1A	O14497	2285 aa		11.76	□□□□□ -0.53
POLE-222	ENST00000545015	CAD	P27708	2225 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015		M0R082	166 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	CHP2	O43745	196 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	LYPD3	O95274	346 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	BGLAP	P02818	100 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	HOXB1	P14653	301 aa	Predicted RBP	11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF43	P17038	809 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	CD40	P25942	277 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	GTF2E2	P29084	291 aa	Known RBP	11.75	□□□□□ -0.53
POLE-222	ENST00000545015	GRPR	P30550	384 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	MDH1	P40925	334 aa	Known RBP	11.75	□□□□□ -0.53
POLE-222	ENST00000545015	SELENOP	P49908	381 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	CDH12	P55289	794 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	LTB	Q06643	244 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	PGGHG	Q32M88	737 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	RABL3	Q5HYI8	236 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	REP15	Q6BDI9	236 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ALKBH2	Q6NS38	261 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ERICH5	Q6P6B1	374 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	NHLRC1	Q6VVB1	395 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	BIVM	Q86UB2	503 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	PCYOX1L	Q8NBM8	494 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	KBTBD8	Q8NFY9	601 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	OR6T1	Q8NGN1	323 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	OR52N5	Q8NH56	324 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF417	Q8TAU3	575 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	SMAP2	Q8WU79	429 aa	Predicted RBP	11.75	□□□□□ -0.53
POLE-222	ENST00000545015	C10orf82	Q8WW14	230 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	NEUROG1	Q92886	237 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF583	Q96ND8	569 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.75	□□□□□ -0.53
POLE-222	ENST00000545015	MCHR1	Q99705	422 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF426	Q9BUY5	554 aa		11.75	□□□□□ -0.53
POLE-222	ENST00000545015	C2CD3	Q4AC94	2353 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF587B	E7ETH6	402 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MS4A18	H0YCH9	400 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015		M0R3H8	397 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	ABCD4	O14678	606 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MRAS	O14807	208 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	TRAF3IP2	O43734	574 aa	Predicted RBP	11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MT-ATP6	P00846	226 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	OPN1SW	P03999	348 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	SOD3	P08294	240 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	SH3BGR	P55822	239 aa	Predicted RBP	11.74	□□□□□ -0.53
POLE-222	ENST00000545015	PRPS1	P60891	318 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	SLC25A3	Q00325	362 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MS4A18	Q3C1V0	323 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	C3orf36	Q3SXR2	165 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	YTHDF3	Q7Z739	585 aa	Known RBP	11.74	□□□□□ -0.53
POLE-222	ENST00000545015	FAM169B	Q8N8A8	192 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	OR4D11	Q8NGI4	311 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	PERP	Q96FX8	193 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MPP4	Q96JB8	637 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	COX4I2	Q96KJ9	171 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	ECSIT	Q9BQ95	431 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	SLC19A3	Q9BZV2	496 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MOV10	Q9HCE1	1003 aa	Known RBP	11.74	□□□□□ -0.53
POLE-222	ENST00000545015	GID8	Q9NWU2	228 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	MRPL39	Q9NYK5	338 aa	Known RBP	11.74	□□□□□ -0.53
POLE-222	ENST00000545015	CISD1	Q9NZ45	108 aa	Known RBP	11.74	□□□□□ -0.53
POLE-222	ENST00000545015	SEC14L4	Q9UDX3	406 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	LAMP3	Q9UQV4	416 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	CAPN7	Q9Y6W3	813 aa		11.74	□□□□□ -0.53
POLE-222	ENST00000545015	AKAP8	O43823	692 aa	Known RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	UPK3A	O75631	287 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	WNT11	O96014	354 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	CD8A	P01732	235 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	THY1	P04216	161 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF83	P51522	516 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	CDH11	P55287	796 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	CLDN17	P56750	224 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	ETFDH	Q16134	617 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	MMEL1	Q495T6	779 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	ENTPD8	Q5MY95	495 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	NIPAL3	Q6P499	406 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	LINGO2	Q7L985	606 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	SNX32	Q86XE0	403 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	TMEM123	Q8N131	208 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	KDM8	Q8N371	416 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	OR1K1	Q8NGR3	316 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms