RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TNFSF10P50591 281 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 ITGADQ13349 1161 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 ZNF766Q5HY98 468 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 PLBD1Q6P4A8 553 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 KCTD8Q6ZWB6 473 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 PRSS48Q7RTY5 328 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 OR52E2Q8NGJ4 325 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 RFKQ969G6 155 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 ZNF703Q9H7S9 590 aaPredicted RBP27.38■■□□□ 1.97
CCM2-219ENST00000544363 H2AFY2Q9P0M6 372 aaPredicted RBP27.38■■□□□ 1.97
CCM2-219ENST00000544363 NCKAP5O14513 1909 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 A0A1W2PNR3 127 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 FAM183AA6NL82 134 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 CDK1P06493 297 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 MEOX1P50221 254 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 RAC1P63000 192 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 C19orf57Q0VDD7 668 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 CCDC81Q6ZN84 652 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 H1FNTQ75WM6 255 aaPredicted RBP27.37■■□□□ 1.97
CCM2-219ENST00000544363 OR4K13Q8NH42 304 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 TTTY12Q9BZ98 90 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 CHST11Q9NPF2 352 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 INIPQ9NRY2 104 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP27.37■■□□□ 1.97
CCM2-219ENST00000544363 TRAPPC4Q9Y296 219 aa27.37■■□□□ 1.97
CCM2-219ENST00000544363 PRR23D1E9PI22 279 aaPredicted RBP27.36■■□□□ 1.97
CCM2-219ENST00000544363 C11orf98E9PRG8 122 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 RNF13O43567 381 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 TXNDC12O95881 172 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 MT-ND2P03891 347 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 PRR23D2P0DMB1 279 aaPredicted RBP27.36■■□□□ 1.97
CCM2-219ENST00000544363 SDHAP31040 664 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 KHDRBS1Q07666 443 aaKnown RBP eCLIP27.36■■□□□ 1.97
CCM2-219ENST00000544363 ST3GAL4Q11206 333 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 ZP4Q12836 540 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 CRMP1Q14194 572 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 SPACA3Q8IXA5 215 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 TMEM178AQ8NBL3 297 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 FAM98AQ8NCA5 519 aaKnown RBP27.36■■□□□ 1.97
CCM2-219ENST00000544363 SLC37A3Q8NCC5 494 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 BBS1Q8NFJ9 593 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 OTULINQ96BN8 352 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 Q96M85 177 aa27.36■■□□□ 1.97
CCM2-219ENST00000544363 A6NHS1 94 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 AHCYP23526 432 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 RFC3P40938 356 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 CDH11P55287 796 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 WIPI1Q5MNZ9 446 aaPredicted RBP27.35■■□□□ 1.97
CCM2-219ENST00000544363 TMPPEQ6ZT21 453 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 GID4Q8IVV7 300 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 STX19Q8N4C7 294 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 PTP4A1Q93096 173 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 MIB2Q96AX9 1013 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 RASD2Q96D21 266 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 SMAD5Q99717 465 aaKnown RBP27.35■■□□□ 1.97
CCM2-219ENST00000544363 MED20Q9H944 212 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 B3GALT5Q9Y2C3 310 aa27.35■■□□□ 1.97
CCM2-219ENST00000544363 TEX13CA0A0J9YWL9 993 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 GLSO94925 669 aaPredicted RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 HPNP05981 417 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 STSP08842 583 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 PAICSP22234 425 aaKnown RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 ACVR2AP27037 513 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 ALDH3B2P48448 385 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 OR2B6P58173 313 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 PLGLB1Q02325 96 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 TLE3Q04726 772 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 HYAL4Q2M3T9 481 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 EMC4Q5J8M3 183 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 GPR139Q6DWJ6 353 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 CYB561A3Q8NBI2 242 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 LSM14AQ8ND56 463 aaKnown RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 SDR9C7Q8NEX9 313 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 SFXN2Q96NB2 322 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 TSPAN32Q96QS1 320 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 CCDC86Q9H6F5 360 aaKnown RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 VCX3AQ9NNX9 186 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 GRHPRQ9UBQ7 328 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 PCDHGB1Q9Y5G3 927 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 FREM3P0C091 2139 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 GJE1A6NN92 205 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 MS4A18H0YCH9 400 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 M0R3G1 203 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 EIF2S3P41091 472 aaKnown RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 PUDPQ08623 228 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 MS4A18Q3C1V0 323 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 ZFP62Q8NB50 900 aaPredicted RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 HCAR1Q9BXC0 346 aa27.34■■□□□ 1.97
CCM2-219ENST00000544363 MRPS18AQ9NVS2 196 aaKnown RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 ZNF346Q9UL40 294 aaKnown RBP27.34■■□□□ 1.97
CCM2-219ENST00000544363 SULT2B1O00204 365 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 AKR7A3O95154 331 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 PMS2P2O95744 297 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 C21orf33P30042 268 aaPredicted RBP27.33■■□□□ 1.97
CCM2-219ENST00000544363 HTR1FP30939 366 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 DIO1P49895 249 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 NADK2Q4G0N4 442 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 NIPAL3Q6P499 406 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 NPEPL1Q8NDH3 523 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 ADPRHL1Q8NDY3 354 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms