RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CDC42EP2	O14613	210 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	RAMP1	O60894	148 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	RCBTB2	O95199	551 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	ASAH2B	P0C7U1	165 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	TMIGD3	P0DMS9	266 aa	Predicted RBP	9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	ANPEP	P15144	967 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	GSTM3	P21266	225 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	FPR3	P25089	353 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	TIMP3	P35625	211 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	H3F3A	P84243	136 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	PUDP	Q08623	228 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	TSPAN31	Q12999	210 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZBED5	Q49AG3	693 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	EEF1A1P5	Q5VTE0	462 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF770	Q6IQ21	691 aa	Predicted RBP	9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	SEM1	Q6ZVN7	128 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	ADGRE4P	Q86SQ3	457 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	TUSC5	Q8IXB3	177 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	ADPRHL1	Q8NDY3	354 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	MOSPD2	Q8NHP6	518 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	RNF128	Q8TEB7	428 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	LIPH	Q8WWY8	451 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	OXGR1	Q96P68	337 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	GPA33	Q99795	319 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	SF3B5	Q9BWJ5	86 aa	Known RBP	9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	UCK2	Q9BZX2	261 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	DCLRE1B	Q9H816	532 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	RNF122	Q9H9V4	155 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	GLRX2	Q9NS18	164 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	OAZ3	Q9UMX2	235 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	EMC9	Q9Y3B6	208 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	NBAS	A2RRP1	2371 aa		9.06	□□□□□ -0.96
CPSF7-221	ENST00000543545	DNAJC13	O75165	2243 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	KMT2B	Q9UMN6	2715 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545		A0A1W2PRG6	482 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MBD3L4	A6NDZ8	208 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MBD3L3	A6NE82	208 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ARRDC5	A6NEK1	342 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MBD3L5	A6NJ08	208 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	HSPB2	A8KAH6	182 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MS4A18	H0YCH9	400 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	PDLIM1	O00151	329 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	GPR171	O14626	319 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	TOX	O94900	526 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	HPR	P00739	348 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ADA	P00813	363 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	F13B	P05160	661 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	YES1	P07947	543 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	CTSS	P25774	331 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	POU1F1	P28069	291 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	GSS	P48637	474 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	SMS	P52788	366 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	CTXN1	P60606	82 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	PRPS1	P60891	318 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	POU3F1	Q03052	451 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	RPL18	Q07020	188 aa	Known RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	COX10	Q12887	443 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	PDK3	Q15120	406 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	TRIP10	Q15642	601 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	HSPB2	Q16082	182 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MS4A18	Q3C1V0	323 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ANKDD1A	Q495B1	522 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	C4orf17	Q53FE4	359 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ALG10	Q5BKT4	473 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	RIPPLY2	Q5TAB7	128 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ABLIM2	Q6H8Q1	611 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MTFR2	Q6P444	385 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	GALNT5	Q7Z7M9	940 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	IGFN1	Q86VF2	1251 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	CCDC71	Q8IV32	467 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ANKK1	Q8NFD2	765 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	OR9K2	Q8NGE7	335 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	FANK1	Q8TC84	345 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	EME1	Q96AY2	570 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	GMPPA	Q96IJ6	420 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	DMRTA2	Q96SC8	542 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	CIB1	Q99828	191 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	NIPSNAP1	Q9BPW8	284 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	PSD2	Q9BQI7	771 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	TACO1	Q9BSH4	297 aa	Known RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	C9orf16	Q9BUW7	83 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	DGCR6L	Q9BY27	220 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	C12orf49	Q9H741	205 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	SMURF2	Q9HAU4	748 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	INIP	Q9NRY2	104 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	TAS2R5	Q9NYW4	299 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	IL20RA	Q9UHF4	553 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	ERRFI1	Q9UJM3	462 aa	Predicted RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	NOSIP	Q9Y314	301 aa	Known RBP	9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	NOX1	Q9Y5S8	564 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545	PCNX3	Q9H6A9	2034 aa		9.05	□□□□□ -0.96
CPSF7-221	ENST00000543545		A0A0G2JNJ9	132 aa		9.04	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF726	A6NNF4	738 aa		9.04	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF716	A6NP11	495 aa		9.04	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF724	A8MTY0	619 aa		9.04	□□□□□ -0.96
CPSF7-221	ENST00000543545	MCIDAS	D6RGH6	385 aa		9.04	□□□□□ -0.96
CPSF7-221	ENST00000543545		H3BN98	237 aa		9.04	□□□□□ -0.96
CPSF7-221	ENST00000543545	KLF4	O43474	513 aa		9.04	□□□□□ -0.96

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