RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	MAGEA2	P43356	314 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	LHX2	P50458	406 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ASCL1	P50553	236 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	POLR2J	P52435	117 aa	Known RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	OR2B6	P58173	313 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	B3GALT5-AS1	P59052	145 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	VBP1	P61758	197 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	NCS1	P62166	190 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	RPP38	P78345	283 aa	Known RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	HMGCS1	Q01581	520 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ACSM2A	Q08AH3	577 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ZNF763	Q0D2J5	394 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	MAPK11	Q15759	364 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	TBCE	Q15813	527 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	HSPB2	Q16082	182 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	NNAT	Q16517	81 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ACKR1	Q16570	336 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SMU1	Q2TAY7	513 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	EIPR1	Q53HC9	387 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SGO1	Q5FBB7	561 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PAGE3	Q5JUK9	113 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	OTUD3	Q5T2D3	398 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ACSM2B	Q68CK6	577 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	CLEC6A	Q6EIG7	209 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SHQ1	Q6PI26	577 aa	Known RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SEZ6L2	Q6UXD5	910 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	DLEU7	Q6UYE1	221 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	IDO2	Q6ZQW0	420 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	IL17REL	Q6ZVW7	336 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	RFPL4B	Q6ZWI9	263 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ZNF767P	Q75MW2	155 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	GDPD3	Q7L5L3	318 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	CCDC190	Q86UF4	302 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SLC51B	Q86UW2	128 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PLCZ1	Q86YW0	608 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SNX29P2	Q8IUI4	249 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	CCDC28A	Q8IWP9	274 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PM20D2	Q8IYS1	436 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SAMD14	Q8IZD0	417 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	OR2L13	Q8N349	312 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	LSMEM1	Q8N8F7	131 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	FADS6	Q8N9I5	356 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	OR7G2	Q8NG99	324 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	OR9A2	Q8NGT5	310 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ZPLD1	Q8TCW7	415 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	C16orf78	Q8WTQ4	265 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	GCDH	Q92947	438 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SEPHS2	Q99611	448 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PITX2	Q99697	317 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	YIPF4	Q9BSR8	244 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	TUBB1	Q9H4B7	451 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	LDAH	Q9H6V9	325 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ANKRA2	Q9H9E1	313 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	CALHM2	Q9HA72	323 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	FOLH1B	Q9HBA9	442 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	GALNT9	Q9HCQ5	603 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	SLC35C2	Q9NQQ7	365 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	POLE4	Q9NR33	117 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PLCXD1	Q9NUJ7	323 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ZNF701	Q9NV72	531 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	NTM	Q9P121	344 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ZNF629	Q9UEG4	869 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PRODH2	Q9UF12	536 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	ACAD8	Q9UKU7	415 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	PRELID1	Q9Y255	219 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	CAB39	Q9Y376	341 aa	Predicted RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	WIF1	Q9Y5W5	379 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	LYVE1	Q9Y5Y7	322 aa		5.76	□□□□□ -1.49
CIT-213	ENST00000543324	YLPM1	P49750	1951 aa	Known RBP	5.76	□□□□□ -1.49
CIT-213	ENST00000543324	MALRD1	Q5VYJ5	2156 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	IGLV3-32	A0A0A0MS00	114 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	FAM220BP	B1ANY3	271 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	SEC14L5	O43304	696 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	GPRIN2	O60269	458 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	FADS1	O60427	444 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	ZIC3	O60481	467 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	SEC22B	O75396	215 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	ERN1	O75460	977 aa	Known RBP	5.75	□□□□□ -1.49
CIT-213	ENST00000543324	IL18BP	O95998	194 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	CST1	P01037	141 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	UROS	P10746	265 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	IL7	P13232	177 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	CD36	P16671	472 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	ZNF708	P17019	499 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	IGFBP5	P24593	272 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	IFNA8	P32881	189 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	ARL1	P40616	181 aa	Predicted RBP	5.75	□□□□□ -1.49
CIT-213	ENST00000543324	CLK3	P49761	638 aa	Known RBP	5.75	□□□□□ -1.49
CIT-213	ENST00000543324	NKX2-5	P52952	324 aa	Predicted RBP	5.75	□□□□□ -1.49
CIT-213	ENST00000543324	PNLIPRP2	P54317	469 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	CASP9	P55211	416 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	WNT3	P56703	355 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	CLDN18	P56856	261 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	MRPS15	P82914	257 aa	Known RBP	5.75	□□□□□ -1.49
CIT-213	ENST00000543324	SORD	Q00796	357 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	PLCXD2	Q0VAA5	305 aa		5.75	□□□□□ -1.49
CIT-213	ENST00000543324	PDE7A	Q13946	482 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms