RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
RTN3-212ENST00000543123 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.57
RTN3-212ENST00000543123 LRIF1Q5T3J3 769 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 FAM69AQ5T7M9 428 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 AGBL2Q5U5Z8 902 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 FAM91A1Q658Y4 838 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 REEP3Q6NUK4 255 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 ANKRD16Q6P6B7 361 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 PODNL1Q6PEZ8 512 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 BLOC1S3Q6QNY0 202 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 NET1Q7Z628 596 aaPredicted RBP11.46□□□□□ -0.57
RTN3-212ENST00000543123 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 ZNF525Q8N782 197 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 LSMEM1Q8N8F7 131 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 PROX1Q92786 737 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 SPDL1Q96EA4 605 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 TNFRSF13CQ96RJ3 184 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 ZNF607Q96SK3 696 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 EVA1AQ9H8M9 152 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 TESQ9UGI8 421 aaKnown RBP11.46□□□□□ -0.57
RTN3-212ENST00000543123 CDC42EP3Q9UKI2 254 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 CHST2Q9Y4C5 530 aa11.46□□□□□ -0.57
RTN3-212ENST00000543123 HEATR1Q9H583 2144 aaKnown RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 ANK3Q12955 4377 aaKnown RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 TRAV36DV7A0A075B6V5 113 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 IGHV1-18A0A0C4DH31 117 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 NDUFS8O00217 210 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 SERPINB7O75635 380 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 PDE5AO76074 875 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 F12P00748 615 aaPredicted RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 NUDT7P0C024 238 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 SLC6A2P23975 617 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 CLDN17P56750 224 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 VLDLRP98155 873 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 CDK6Q00534 326 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 IL1RL1Q01638 556 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 CHRFAM7AQ494W8 412 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 ALG10BQ5I7T1 473 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 ULK3Q6PHR2 472 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 DHRS4L2Q6PKH6 230 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 SLC46A3Q7Z3Q1 461 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 CCDC36Q8IYA8 594 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 ADPRHL1Q8NDY3 354 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 OR4F15Q8NGB8 312 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 NFKBIDQ8NI38 313 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 DYDC1Q8WWB3 177 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 BCL2L2Q92843 193 aaPredicted RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 FBXO17Q96EF6 278 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 KTI12Q96EK9 354 aaPredicted RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 SLC47A1Q96FL8 570 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 OXGR1Q96P68 337 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 EPYCQ99645 322 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 PTDSS2Q9BVG9 487 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 RABEP2Q9H5N1 569 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 MYOZ1Q9NP98 299 aaPredicted RBP11.45□□□□□ -0.58
RTN3-212ENST00000543123 CCDC167Q9P0B6 97 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 ADAM21Q9UKJ8 722 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 CORINQ9Y5Q5 1042 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 GMEB1Q9Y692 573 aa11.45□□□□□ -0.58
RTN3-212ENST00000543123 LOC102725191A0A1B0GVB3 256 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 A0A1B0GWA3 101 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 FZD7O75084 574 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 ERCC1P07992 297 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 VIMP08670 466 aaKnown RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 NQO1P15559 274 aaKnown RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 HOXB9P17482 250 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 SERPINF1P36955 418 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 IDH3AP50213 366 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 PDLIM4P50479 330 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 ATP4BP51164 291 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 RGS8P57771 180 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 HOXC5Q00444 222 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 EGR4Q05215 589 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 H1FNTQ75WM6 255 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 CXXC5Q7LFL8 322 aaKnown RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 RANBP3LQ86VV4 465 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 SNX32Q86XE0 403 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 C10orf105Q8TEF2 133 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 MDFIQ99750 246 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 TMEM38AQ9H6F2 299 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 TMEM27Q9HBJ8 222 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 CA10Q9NS85 328 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 SLC25A37Q9NYZ2 338 aa11.44□□□□□ -0.58
RTN3-212ENST00000543123 CRNNQ9UBG3 495 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
RTN3-212ENST00000543123 A0A096LNT2 108 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 B9A039 149 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 M0R082 166 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms