RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RGS21Q2M5E4 152 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 KLHL38Q2WGJ6 581 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 SPECC1LQ69YQ0 1117 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 ARMCX2Q7L311 632 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 CDKL3Q8IVW4 592 aaPredicted RBP3.77□□□□□ -1.81
YBX3-210ENST00000540975 SYCE1Q8N0S2 351 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 MRPL43Q8N983 215 aaKnown RBP3.77□□□□□ -1.81
YBX3-210ENST00000540975 FAM133AQ8N9E0 248 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 TRPV1Q8NER1 839 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 OR2T33Q8NG76 320 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 TEX47Q8TBZ9 253 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 DQX1Q8TE96 717 aaKnown RBP3.77□□□□□ -1.81
YBX3-210ENST00000540975 C7orf33Q8WU49 177 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 SCFD1Q8WVM8 642 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 IL1F10Q8WWZ1 152 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 SRSF12Q8WXF0 261 aaKnown RBP3.77□□□□□ -1.81
YBX3-210ENST00000540975 SLC35E1Q96K37 410 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 CCDC42Q96M95 316 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 RPRD1AQ96P16 312 aaPredicted RBP3.77□□□□□ -1.81
YBX3-210ENST00000540975 TESK2Q96S53 571 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 NMNAT2Q9BZQ4 307 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 TPK1Q9H3S4 243 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 NEK6Q9HC98 313 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 TMOD2Q9NZR1 351 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 STX18Q9P2W9 335 aaKnown RBP3.77□□□□□ -1.81
YBX3-210ENST00000540975 CYTH4Q9UIA0 394 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 KLK12Q9UKR0 248 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 FANCAO15360 1455 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 MYOM2P54296 1465 aa3.77□□□□□ -1.81
YBX3-210ENST00000540975 ABCA8O94911 1581 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 LMTK2Q8IWU2 1503 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 DUOX2Q9NRD8 1548 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 AK9Q5TCS8 1911 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 MED14O60244 1454 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 ATP10BO94823 1461 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 MAGI2Q86UL8 1455 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 WDR7Q9Y4E6 1490 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 GSAPA4D1B5 854 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 RNF222A6NCQ9 220 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 WASHC1A8K0Z3 465 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 LIN7AO14910 233 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 CTAG2O75638 210 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 SUPT7LO94864 414 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 ANXA4P09525 319 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 STAG3L3P0CL85 134 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 HOXB8P17481 243 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 SYT1P21579 422 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 NMT1P30419 496 aaKnown RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 BTDP43251 543 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 GNPDA1P46926 289 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 ATXN3P54252 364 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 MTTPP55157 894 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 TIMM10P62072 90 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 CDC20Q12834 499 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 GPM6BQ13491 265 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 PDK1Q15118 436 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 PON2Q15165 354 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 MPPED2Q15777 294 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 TTMPQ5BVD1 217 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 THEM4Q5T1C6 240 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 PVRIGQ6DKI7 326 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 OR8G2PQ6IF36 304 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 TMEM184AQ6ZMB5 413 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 TMCO2Q7Z6W1 182 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 ZNF433Q8N7K0 673 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 ZSCAN4Q8NAM6 433 aaPredicted RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 OR52M1Q8NGK5 317 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 IFT81Q8WYA0 676 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 PANX2Q96RD6 677 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 GPR61Q9BZJ8 451 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 NDEL1Q9GZM8 345 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 SLC25A51Q9H1U9 297 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 TREM1Q9NP99 234 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 NRBP2Q9NSY0 501 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 C1orf123Q9NWV4 160 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 SOHLH2Q9NX45 425 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 MRPL39Q9NYK5 338 aaKnown RBP3.76□□□□□ -1.81
YBX3-210ENST00000540975 RIMS3Q9UJD0 308 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 PLA2G4CQ9UP65 541 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 WDR45Q9Y484 360 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 CACNG2Q9Y698 323 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 CLCA3PQ9Y6N3 262 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 TRPM1Q7Z4N2 1603 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 PPIP5K1Q6PFW1 1433 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 ABCC11Q96J66 1382 aa3.76□□□□□ -1.81
YBX3-210ENST00000540975 NRXN1Q9ULB1 1477 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 RNF17Q9BXT8 1623 aaKnown RBP3.75□□□□□ -1.81
YBX3-210ENST00000540975 IGHV1OR15-1A0A075B7D0 117 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 A0A1W2PQ67 120 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 ANKRD65E5RJM6 399 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 SPECC1L-ADORA2AF8WAN1 911 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 LGALS8O00214 317 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 DNALI1O14645 258 aaPredicted RBP3.75□□□□□ -1.81
YBX3-210ENST00000540975 IGHV3-48P01763 117 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 NCF1P14598 390 aaPredicted RBP3.75□□□□□ -1.81
YBX3-210ENST00000540975 MX1P20591 662 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 CRABP2P29373 138 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 RRM2P31350 389 aa3.75□□□□□ -1.81
YBX3-210ENST00000540975 DAZ2Q13117 558 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms