RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 ARMC8Q8IUR7 673 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 SLC30A8Q8IWU4 369 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 C11orf65Q8NCR3 313 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 OR6S1Q8NH40 331 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 MAGEE2Q8TD90 523 aaPredicted RBP12.96□□□□□ -0.33
DDX11-217ENST00000540935 ANKRD27Q96NW4 1050 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 EPYCQ99645 322 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 CPPED1Q9BRF8 314 aaPredicted RBP12.96□□□□□ -0.33
DDX11-217ENST00000540935 C1QTNF6Q9BXI9 259 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 MRGBPQ9NV56 204 aa12.96□□□□□ -0.33
DDX11-217ENST00000540935 A0A087WUJ7 227 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 AKAP8O43823 692 aaKnown RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 TPST1O60507 370 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 EDF1O60869 148 aaKnown RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 MFN2O95140 757 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 ACVR1BP36896 505 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 FABP6P51161 128 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 CLDN17P56750 224 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 UBE2NP61088 152 aaKnown RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 PPP2R2BQ00005 443 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 SLC25A3Q00325 362 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 C1DQ13901 141 aaKnown RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 CYP51A1Q16850 503 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 TBRG1Q3YBR2 411 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 HIKESHIQ53FT3 197 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 C11orf71Q6IPW1 123 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 DNM1P46Q6ZS02 220 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 H1FNTQ75WM6 255 aaPredicted RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 DHDDSQ86SQ9 333 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 LSRQ86X29 649 aaPredicted RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 ADPRHL1Q8NDY3 354 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 TAAR8Q969N4 342 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 ALKBH3Q96Q83 286 aaPredicted RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 CGREF1Q99674 301 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 CACNG6Q9BXT2 260 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 RSPO3Q9BXY4 272 aaPredicted RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 REG4Q9BYZ8 158 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 ZNF385DQ9H6B1 395 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 NPHS2Q9NP85 383 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 CORINQ9Y5Q5 1042 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 NAV3Q8IVL0 2385 aa12.95□□□□□ -0.34
DDX11-217ENST00000540935 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
DDX11-217ENST00000540935 ARPC4-TTLL3A0A0A6YYG9 625 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 A0A0B4J2E0 115 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 A0A1B0GX12 115 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 RNF223E7ERA6 249 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 RPL36A-HNRNPH2H7BZ11 118 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 M0R082 166 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 FMO6PO60774 539 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 SLC43A1O75387 559 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 LGI1O95970 557 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 C8BP07358 591 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 AQP1P29972 269 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 GRPRP30550 384 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 APOBEC3AP31941 199 aaPredicted RBP12.94□□□□□ -0.34
DDX11-217ENST00000540935 PCBP3P57721 371 aaKnown RBP12.94□□□□□ -0.34
DDX11-217ENST00000540935 DSCR9P59020 149 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 OR1Q1Q15612 314 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 C3orf36Q3SXR2 165 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 ANKRD16Q6P6B7 361 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 COMTD1Q86VU5 262 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 SCAIQ8N9R8 606 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 ZNF417Q8TAU3 575 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 THOC1Q96FV9 657 aaKnown RBP12.94□□□□□ -0.34
DDX11-217ENST00000540935 ZNF587Q96SQ5 575 aaPredicted RBP12.94□□□□□ -0.34
DDX11-217ENST00000540935 KCNS3Q9BQ31 491 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 KLHL14Q9P2G3 628 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 B3GAT1Q9P2W7 334 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 GDF2Q9UK05 429 aaPredicted RBP12.94□□□□□ -0.34
DDX11-217ENST00000540935 ATP23Q9Y6H3 246 aa12.94□□□□□ -0.34
DDX11-217ENST00000540935 NIPBLQ6KC79 2804 aaeCLIP12.94□□□□□ -0.34
DDX11-217ENST00000540935 PLCE1Q9P212 2302 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 A0A0G2JND7 137 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 H7C417 338 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 UPK3AO75631 287 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 ZNF432O94892 652 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 VIMP08670 466 aaKnown RBP12.93□□□□□ -0.34
DDX11-217ENST00000540935 NUDT6P53370 316 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 ROR2Q01974 943 aaKnown RBP12.93□□□□□ -0.34
DDX11-217ENST00000540935 DMTNQ08495 405 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 NFYCQ13952 458 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 RAB35Q15286 201 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 INTS11Q5TA45 600 aaKnown RBP12.93□□□□□ -0.34
DDX11-217ENST00000540935 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 PATL1Q86TB9 770 aaKnown RBP12.93□□□□□ -0.34
DDX11-217ENST00000540935 PTOV1Q86YD1 416 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 KDM8Q8N371 416 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 FAM169BQ8N8A8 192 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 PIK3C3Q8NEB9 887 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 BCL2L2Q92843 193 aaPredicted RBP12.93□□□□□ -0.34
DDX11-217ENST00000540935 SLC41A3Q96GZ6 507 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms