RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MS4A18Q3C1V0 323 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 NRMQ8IXM6 262 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 ZNF610Q8N9Z0 462 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 RELL2Q8NC24 303 aaPredicted RBP13.78□□□□□ -0.2
DDB1-218ENST00000540784 OR9K2Q8NGE7 335 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 OR5J2Q8NH18 312 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 RSRC1Q96IZ7 334 aaKnown RBP13.78□□□□□ -0.2
DDB1-218ENST00000540784 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 C12orf49Q9H741 205 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 YY1AP1Q9H869 796 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 C20orf141Q9NUB4 165 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 PARPBPQ9NWS1 579 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 JKAMPQ9P055 326 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
DDB1-218ENST00000540784 NOSIPQ9Y314 301 aaKnown RBP13.78□□□□□ -0.2
DDB1-218ENST00000540784 KLF2Q9Y5W3 355 aaPredicted RBP13.78□□□□□ -0.2
DDB1-218ENST00000540784 TRBV4-1A0A0J9YWV2 114 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 A1L4Q6 167 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 TNFRSF11BO00300 401 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 PIP5K1CO60331 668 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 MRPL33O75394 65 aaKnown RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 ZNF43P17038 809 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 AHCYP23526 432 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 ASCL1P50553 236 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 HMGA2P52926 109 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDB1-218ENST00000540784 OR2T5Q6IEZ7 315 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 CREB3L2Q70SY1 520 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 LUZP2Q86TE4 346 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 STK32CQ86UX6 486 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 ZNF100Q8IYN0 542 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 ADPRHL1Q8NDY3 354 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 OR2T29Q8NH02 315 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 LIPHQ8WWY8 451 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 UTP4Q969X6 686 aaKnown RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 PSMG3-AS1Q96PY0 264 aa13.77□□□□□ -0.21
DDB1-218ENST00000540784 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 OPN3Q9H1Y3 402 aaPredicted RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 KRCC1Q9NPI7 259 aaPredicted RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 CCM2LQ9NUG4 571 aaPredicted RBP13.77□□□□□ -0.21
DDB1-218ENST00000540784 SH3PXD2BA1X283 911 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 EFCAB9A8MZ26 197 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 BLOC1S5-TXNDC5H3BN57 136 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 GNGT2O14610 69 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 CLDN1O95832 211 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 CST1P01037 141 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 ADORA3P0DMS8 318 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 MAKP20794 623 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 ZP4Q12836 540 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 POU4F3Q15319 338 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 SEC23BQ15437 767 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 ZSCAN26Q16670 478 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 TMPRSS11FQ6ZWK6 438 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 AAED1Q7RTV5 226 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 MEX3DQ86XN8 651 aaKnown RBP13.76□□□□□ -0.21
DDB1-218ENST00000540784 EPHX4Q8IUS5 362 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 UEVLDQ8IX04 471 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 ZIC4Q8N9L1 334 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 PAPD5Q8NDF8 572 aaKnown RBP13.76□□□□□ -0.21
DDB1-218ENST00000540784 FUZQ9BT04 418 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 RBM24Q9BX46 236 aaKnown RBP13.76□□□□□ -0.21
DDB1-218ENST00000540784 REEP1Q9H902 201 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 TAS2R5Q9NYW4 299 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 TMEM5Q9Y2B1 443 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 NOX1Q9Y5S8 564 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 FLVCR1Q9Y5Y0 555 aa13.76□□□□□ -0.21
DDB1-218ENST00000540784 DOCK7Q96N67 2140 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 NCOA6Q14686 2063 aaPredicted RBP13.75□□□□□ -0.21
DDB1-218ENST00000540784 PRSS44E7EML9 344 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 RNF13O43567 381 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 FKBP6O75344 327 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 SAGP10523 405 aaPredicted RBP13.75□□□□□ -0.21
DDB1-218ENST00000540784 UQCRC1P31930 480 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 NTF4P34130 210 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 IFNGR2P38484 337 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 OR3A2P47893 321 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 PUDPQ08623 228 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 CCNIQ14094 377 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 LAPTM4AQ15012 233 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 EXOC3L2Q2M3D2 409 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 FBXL19-AS1Q494R0 122 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 ZNF474Q6S9Z5 364 aaPredicted RBP13.75□□□□□ -0.21
DDB1-218ENST00000540784 BEND4Q6ZU67 534 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 NANOGNBQ7Z5D8 188 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 OAFQ86UD1 273 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 OR4K5Q8NGD3 323 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 RNASE6Q93091 150 aaKnown RBP13.75□□□□□ -0.21
DDB1-218ENST00000540784 SLCO4A1Q96BD0 722 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 FANCFQ9NPI8 374 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 ELOVL5Q9NYP7 299 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 FOXD3Q9UJU5 478 aaPredicted RBP13.75□□□□□ -0.21
DDB1-218ENST00000540784 MED12LQ86YW9 2145 aa13.75□□□□□ -0.21
DDB1-218ENST00000540784 PCNX1Q96RV3 2341 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 C11orf98E9PRG8 122 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms