RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 RPS26P11Q5JNZ5 115 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 ANKRD16Q6P6B7 361 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF613Q6PF04 617 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 CLEC2AQ6UVW9 174 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 CREB3L2Q70SY1 520 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 H1FNTQ75WM6 255 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 HDDC2Q7Z4H3 204 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 DHDDSQ86SQ9 333 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 FUNDC1Q8IVP5 155 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 MUC15Q8N387 334 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 PCYOX1LQ8NBM8 494 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 KBTBD8Q8NFY9 601 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 MAL2Q969L2 176 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 ZBTB9Q96C00 473 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 SLC25A36Q96CQ1 311 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 EBF4Q9BQW3 602 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 RHNO1Q9BSD3 238 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 TMEM43Q9BTV4 400 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 TRAF4Q9BUZ4 470 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 KATNB1Q9BVA0 655 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 SLC19A3Q9BZV2 496 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 POLR2J2Q9GZM3 115 aaKnown RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 POLR2J3Q9H1A7 115 aaKnown RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 DENND2DQ9H6A0 471 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 MYOZ1Q9NP98 299 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 VAPAQ9P0L0 249 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 SPEF1Q9Y4P9 236 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 NOX1Q9Y5S8 564 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 FKBP7Q9Y680 259 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 A0A087WUJ7 227 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ARPC4-TTLL3A0A0A6YYG9 625 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 A0A0G2JND7 137 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ZC3H12DA2A288 527 aaKnown RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF726A6NNF4 738 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 SHISA9B4DS77 424 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 EDF1O60869 148 aaKnown RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 FZD7O75084 574 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 PLAUP00749 431 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF16P17020 682 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 APOBEC3AP31941 199 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 TTKP33981 857 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 RPS5P46782 204 aaKnown RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 SNRPD2P62316 118 aaKnown RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 PLAURQ03405 335 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 NFYCQ13952 458 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 GTDC1Q4AE62 458 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 TTMPQ5BVD1 217 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 TSPO2Q5TGU0 170 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 NIPAL3Q6P499 406 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ERICH5Q6P6B1 374 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 UEVLDQ8IX04 471 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 OR4F15Q8NGB8 312 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
CDCA3-208ENST00000540683 MPP4Q96JB8 637 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 LRR1Q96L50 414 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ANKRD27Q96NW4 1050 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 GID8Q9NWU2 228 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 SLC25A37Q9NYZ2 338 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 BAG5Q9UL15 447 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ATP23Q9Y6H3 246 aa9.12□□□□□ -0.95
CDCA3-208ENST00000540683 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 A0A1B0GWA3 101 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HTR3EA5X5Y0 456 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 FTCDNL1E5RQL4 147 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 RPL36A-HNRNPH2H7BZ11 118 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 H7C417 338 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 NDUFAB1O14561 156 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 SLC22A2O15244 555 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 TLX2O43763 284 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 MGRN1O60291 552 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 PDE5AO76074 875 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HIST1H2ABP04908 130 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 SOD3P08294 240 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 H2AFXP16104 143 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HOXB9P17482 250 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 LSP1P33241 339 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 ARR3P36575 388 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 NUDT6P53370 316 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 BNIP2Q12982 314 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 PGGHGQ32M88 737 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 TRMT5Q32P41 509 aaKnown RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 RUNDC3AQ59EK9 446 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 PAGE3Q5JUK9 113 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HIST3H2AQ7L7L0 130 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 DPPA2Q7Z7J5 298 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 C10orf53Q8N6V4 93 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 OR1K1Q8NGR3 316 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 PROX1Q92786 737 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HIST1H2ACQ93077 130 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF385AQ96PM9 386 aaKnown RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 SLC38A2Q96QD8 506 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 CGREF1Q99674 301 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 CPPED1Q9BRF8 314 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 NPHS2Q9NP85 383 aa9.11□□□□□ -0.95
CDCA3-208ENST00000540683 MRPL39Q9NYK5 338 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms