RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 A0A096LPE4 126 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 A0A0G2JPF8 293 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 A0A1W2PPZ6 126 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 TMEM247A6NEH6 219 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 TRPC5OSA6NMA1 111 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 HNRNPCL2B2RXH8 293 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 HNRNPCL3B7ZW38 293 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 NR5A2O00482 541 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 HNRNPCL1O60812 293 aaKnown RBP10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF432O94892 652 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 BCHEP06276 602 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 TACSTD2P09758 323 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 HNRNPCL4P0DMR1 293 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 PNMTP11086 282 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 PRG2P13727 222 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 ETFAP13804 333 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 DAOP14920 347 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF43P17038 809 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 NPR2P20594 1047 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 GTF2E2P29084 291 aaKnown RBP10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 ARR3P36575 388 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 CRATP43155 626 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 CHN2P52757 468 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 DSTNP60981 165 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 POU3F1Q03052 451 aaPredicted RBP10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 HGFACQ04756 655 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 LGALS3BPQ08380 585 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 BST1Q10588 318 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 VHLLQ6RSH7 139 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 C5orf46Q6UWT4 87 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 MSANTD1Q6ZTZ1 278 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 LSRQ86X29 649 aaPredicted RBP10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF786Q8N393 782 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 CLIP4Q8N3C7 705 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 RFLNBQ8N5W9 214 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 IL17RDQ8NFM7 739 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 SLC38A5Q8WUX1 472 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 PTDSS2Q9BVG9 487 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 TPT1P8Q9HAU6 139 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 C12orf10Q9HB07 376 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 CHST2Q9Y4C5 530 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 PCDHB14Q9Y5E9 798 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
CBX3P4-202ENST00000540428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 LOC102725191A0A1B0GVB3 256 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 SLCO1B7G3V0H7 640 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 hCG_2039718K7EN88 272 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 HAX1O00165 279 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 HDAC3O15379 428 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 AKAP8O43823 692 aaKnown RBP10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 OR2T1O43869 369 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 LILRA1O75019 489 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 SLC43A1O75387 559 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 ANP32DO95626 131 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 IDO1P14902 403 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 CLDN17P56750 224 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 TUBA1BP68363 451 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 TUBA4AP68366 448 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 EGR4Q05215 589 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 PDCD4Q53EL6 469 aaKnown RBP10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 TNFAIP8L3Q5GJ75 292 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 C6orf89Q6UWU4 347 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 TUBA1AQ71U36 451 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 SERPINA11Q86U17 422 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 GPR137CQ8N3F9 429 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 TRIM44Q96DX7 344 aaPredicted RBP10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 C1orf159Q96HA4 380 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 TMEM19Q96HH6 336 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 OXGR1Q96P68 337 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 SOX7Q9BT81 388 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 WDR55Q9H6Y2 383 aaPredicted RBP10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 RMND5AQ9H871 391 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 BCL2L10Q9HD36 194 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 SLC6A13Q9NSD5 602 aa10.4□□□□□ -0.74
CBX3P4-202ENST00000540428 SVEP1Q4LDE5 3571 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 IGHV2OR16-5A0A0B4J2B6 119 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 TMEM129A0AVI4 362 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 LRP5LA4QPB2 252 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 AIM2O14862 343 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 TCF21O43680 179 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC22A3O75751 556 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 CELA3BP08861 270 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 EPHA3P29320 983 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 THBS4P35443 961 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 RPS5P46782 204 aaKnown RBP10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 ARF1P84077 181 aaKnown RBP10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 MPP2Q14168 576 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF311Q5JNZ3 666 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 RPS26P11Q5JNZ5 115 aaPredicted RBP10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 FAM69AQ5T7M9 428 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 ATG16L1Q676U5 607 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 SPATA21Q7Z572 469 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 NET1Q7Z628 596 aaPredicted RBP10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 KDM8Q8N371 416 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 SVOPLQ8N434 492 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 LINC01356Q8N9X3 169 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 PIK3C3Q8NEB9 887 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC25A36Q96CQ1 311 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms