RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 NRIP3Q9NQ35 241 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 DHCR7Q9UBM7 475 aaKnown RBP10.5□□□□□ -0.73
C11orf54-214ENST00000540113 PLCL2Q9UPR0 1127 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF337Q9Y3M9 751 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 KHNYNO15037 678 aaKnown RBP10.5□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF749O43361 778 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 OR8G3PP0DMU2 310 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 PTHLHP12272 177 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 GIFP27352 417 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 FCN2Q15485 313 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 TRAM1Q15629 374 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 BTBD16Q32M84 506 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 KLHL26Q53HC5 615 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 YIF1BQ5BJH7 314 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 BEST4Q8NFU0 473 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF671Q8TAW3 534 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 PTPMT1Q8WUK0 201 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-214ENST00000540113 YIPF5Q969M3 257 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
C11orf54-214ENST00000540113 KTI12Q96EK9 354 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-214ENST00000540113 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 ADOQ96SZ5 270 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 FOXQ1Q9C009 403 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 EVA1AQ9H8M9 152 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 UCKL1Q9NWZ5 548 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 KLHL21Q9UJP4 597 aa10.5□□□□□ -0.73
C11orf54-214ENST00000540113 ING1Q9UK53 422 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-214ENST00000540113 SEC16AO15027 2179 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 TMEM72A0PK05 275 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 EFCAB7A8K855 629 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 NOTOA8MTQ0 251 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 S100A1P23297 94 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 EFNA3P52797 238 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CTXN1P60606 82 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 EGR4Q05215 589 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 NDUFA5Q16718 116 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 HSD17B12Q53GQ0 312 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 TMEM151BQ8IW70 566 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 LSM14AQ8ND56 463 aaKnown RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 RGP1Q92546 391 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 AKAP1Q92667 903 aaKnown RBP eCLIP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 PHF21AQ96BD5 680 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ALG12Q9BV10 488 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ANKRD10Q9NXR5 420 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CEP192Q8TEP8 1941 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ASXL3Q9C0F0 2248 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 PCNX3Q9H6A9 2034 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 BLACEA4D250 179 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 TLCD2A6NGC4 264 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CD53P19397 219 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 GRK6P43250 576 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 SOX2P48431 317 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ACTA2P62736 377 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 SKP1P63208 163 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ACTG2P63267 376 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 TOMM34Q15785 309 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 LINC01590Q5TEZ4 76 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 C1QL3Q5VWW1 255 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 PYHIN1Q6K0P9 492 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 RPL22L1Q6P5R6 122 aaKnown RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 KANSL1Q7Z3B3 1105 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CMTM4Q8IZR5 234 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 TCTE3Q8IZS6 198 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ABCA7Q8IZY2 2146 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 TOMM5Q8N4H5 51 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 POMGNT2Q8NAT1 580 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 ADAMTS18Q8TE60 1221 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 RNF166Q96A37 237 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CREB3L1Q96BA8 519 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CDX2Q99626 313 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-214ENST00000540113 NANSQ9NR45 359 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 LANCL2Q9NS86 450 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 GMEB2Q9UKD1 530 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 CACNA1CQ13936 2221 aa10.49□□□□□ -0.73
C11orf54-214ENST00000540113 FITM1A5D6W6 292 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ANKRD34BA5PLL1 514 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 TSC22D2O75157 780 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ZFPL1O95159 310 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 UTS2O95399 124 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 UCHL1P09936 223 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 UBL4AP11441 157 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF16P17020 682 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 SRMP19623 302 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 GZMKP49863 264 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 HSD17B7P56937 341 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 RPS4XP62701 263 aaKnown RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ZP2Q05996 745 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 LGALS3BPQ08380 585 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 SKP2Q13309 424 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 GGTLC2Q14390 218 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 GRM7Q14831 915 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 UBXN2BQ14CS0 331 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF74Q16587 644 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 JAZF1Q86VZ6 243 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 SYS1Q8N2H4 156 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 DNAAF1Q8NEP3 725 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF563Q8TA94 476 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 NMNAT2Q9BZQ4 307 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms