RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CACNA1CQ13936 2221 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 TRBV4-1A0A0J9YWV2 114 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 A0A1W2PRQ8 180 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 DHRS12A0PJE2 317 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 A8MXE2 369 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 GPR171O14626 319 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 MSTNO14793 375 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 VAMP5O95183 116 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 GADD45GO95257 159 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 HPRP00739 348 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 UMPSP11172 480 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 IFI30P13284 250 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 NQO1P15559 274 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 FUT1P19526 365 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 MAKP20794 623 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 COL8A1P27658 744 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 PRKCDQ05655 676 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 DGCR6Q14129 220 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 FBXL19-AS1Q494R0 122 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 TFAP2EQ6VUC0 442 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 MBOAT2Q6ZWT7 520 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 CREB3L2Q70SY1 520 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 GALNT5Q7Z7M9 940 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 NRMQ8IXM6 262 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 ADPRHL1Q8NDY3 354 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 OR5J2Q8NH18 312 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC7A13Q8TCU3 470 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 POP5Q969H6 163 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 OXGR1Q96P68 337 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF385AQ96PM9 386 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 FUZQ9BT04 418 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 RBM24Q9BX46 236 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 PLEKHB1Q9UF11 243 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 PRSS50Q9UI38 385 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 B3GALT5Q9Y2C3 310 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 FLNCQ14315 2725 aa11.28□□□□□ -0.6
TSPAN9-207ENST00000539631 C11orf98E9PRG8 122 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 PLPP3O14495 311 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 IGF2P01344 180 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 RAP2AP10114 183 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 UQCRC1P31930 480 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 OR3A2P47893 321 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 SMIM11AP58511 58 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 POU4F3Q15319 338 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 SEC23BQ15437 767 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 C1orf146Q5VVC0 180 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 CASP12Q6UXS9 341 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 EPHX4Q8IUS5 362 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 RNF113BQ8IZP6 322 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 LIPHQ8WWY8 451 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 RNASE6Q93091 150 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 GALNT8Q9NY28 637 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 TAS2R5Q9NYW4 299 aa11.27□□□□□ -0.61
TSPAN9-207ENST00000539631 SH3PXD2BA1X283 911 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 MRPL33O75394 65 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 CIB2O75838 187 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 OR6A2O95222 327 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 ADORA3P0DMS8 318 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 ZNF43P17038 809 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 AHCYP23526 432 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 GPR4P46093 362 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 CLDN17P56750 224 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 PUDPQ08623 228 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 ZP4Q12836 540 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 PPP1R8Q12972 351 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 SNTB1Q13884 538 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 C1DQ13901 141 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 CCNIQ14094 377 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 SP5Q6BEB4 398 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 HIST2H2BCQ6DN03 193 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 AAED1Q7RTV5 226 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 NANOGNBQ7Z5D8 188 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 STK32CQ86UX6 486 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 UEVLDQ8IX04 471 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 ZNF100Q8IYN0 542 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 CDK20Q8IZL9 346 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 OR4K5Q8NGD3 323 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 TMEM45BQ96B21 275 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 FAM46AQ96IP4 442 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-207ENST00000539631 RSRC1Q96IZ7 334 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms