RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZNF433Q8N7K0 673 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 OR52R1Q8NGF1 315 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 MOSPD2Q8NHP6 518 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF417Q8TAU3 575 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 PNPLA2Q96AD5 504 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ELMOD3Q96FG2 381 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ZDHHC4Q9NPG8 344 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 POT1Q9NUX5 634 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 MED11Q9P086 117 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 KLK11Q9UBX7 282 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ING1Q9UK53 422 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SCML1Q9UN30 329 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 COL4A2P08572 1712 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 MFSD2BA6NFX1 497 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 NPIPB9F8W1W9 429 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 H0YGG7 62 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 TNFRSF10CO14798 259 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 XRCC3O43542 346 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 RP2O75695 350 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SERPINI2O75830 405 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 RBBP9O75884 186 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 HIST1H2ABP04908 130 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ADRB1P08588 477 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ACSM4P0C7M7 580 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 RAD52P43351 418 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SOX9P48436 509 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 TAS2R20P59543 309 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ID2Q02363 134 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ALKBH1Q13686 389 aaKnown RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 EXOSC7Q15024 291 aaKnown RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 LINC00303Q3SY05 128 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 EMC4Q5J8M3 183 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 HIST3H2AQ7L7L0 130 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 OVCH2Q7RTZ1 564 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF614Q8N883 585 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 BAHD1Q8TBE0 780 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 PHOSPHO2Q8TCD6 241 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 HIST1H2ACQ93077 130 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 BEX1Q9HBH7 125 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SDHAF2Q9NX18 166 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 PFDN2Q9UHV9 154 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 A0A1B0GW55 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 ACOD1A6NK06 481 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 C2orf74A8MZ97 194 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 H7C417 338 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 OR10H2O60403 315 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 SELENOFO60613 162 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DNAJB6O75190 326 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 GLSO94925 669 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-209ENST00000539584 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-209ENST00000539584 CT62P0C5K7 136 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4L2P0CJ85 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4L3P0CJ86 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4L4P0CJ87 422 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4L5P0CJ88 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4L6P0CJ89 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4L7P0CJ90 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 PPP3CBP16298 524 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 CXCL2P19875 107 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 CDK2P24941 298 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 TNFRSF4P43489 277 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 EMDP50402 254 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 ADPRHP54922 357 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 NFATC4Q14934 902 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 TOMM20Q15388 145 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 TMEM255AQ5JRV8 349 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 LINC01590Q5TEZ4 76 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 RGS7BPQ6MZT1 257 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-209ENST00000539584 KIRREL2Q6UWL6 708 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 KANSL1Q7Z3B3 1105 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DGLUCYQ7Z3D6 616 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 GLB1L2Q8IW92 636 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 EIF4E3Q8N5X7 224 aaKnown RBP12.12□□□□□ -0.47
UBE3B-209ENST00000539584 OR6K6Q8NGW6 343 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-209ENST00000539584 CLIP3Q96DZ5 547 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 WBP1Q96G27 269 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 Q9N2J8 555 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 DUX4Q9UBX2 424 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 MTFP1Q9UDX5 166 aa12.12□□□□□ -0.47
UBE3B-209ENST00000539584 A6NCN8 305 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 SYNDIG1LA6NDD5 238 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 PHYHO14832 338 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 MAGEB4O15481 346 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 AQP8O94778 261 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 PNMTP11086 282 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 CTRB1P17538 263 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 FCARP24071 287 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms