RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 B3GAT1Q9P2W7 334 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 CLEC4AQ9UMR7 237 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 SLC5A6Q9Y289 635 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 SPIN1Q9Y657 262 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 HCFC1P51610 2035 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 TRAV36DV7A0A075B6V5 113 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 A0A1B0GUH1 482 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 H0YAE9 185 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 MS4A18H0YCH9 400 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 CGAP01215 116 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 TSPAN19P0C672 248 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 FKBP2P26885 142 aaKnown RBP11.57□□□□□ -0.56
CCDC42-202ENST00000539522 GRPRP30550 384 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 IFNGR2P38484 337 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 RBM34P42696 430 aaKnown RBP11.57□□□□□ -0.56
CCDC42-202ENST00000539522 DAPP51397 102 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 OR2B6P58173 313 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 RPS3AP61247 264 aaKnown RBP11.57□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF74Q16587 644 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 MS4A18Q3C1V0 323 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 KDM4DQ6B0I6 523 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 VWA1Q6PCB0 445 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 HS3ST5Q8IZT8 346 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 ZIC4Q8N9L1 334 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 ATG16L2Q8NAA4 619 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 OR10G2Q8NGC3 310 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 RNF217Q8TC41 542 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 CPNE4Q96A23 557 aaPredicted RBP11.57□□□□□ -0.56
CCDC42-202ENST00000539522 FEVQ99581 238 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF556Q9HAH1 456 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 KLHL13Q9P2N7 655 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 MGAT4BQ9UQ53 548 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 DOPEY1Q5JWR5 2465 aa11.57□□□□□ -0.56
CCDC42-202ENST00000539522 NBPF19A0A087WUL8 3843 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 A0A1W2PNV4 684 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 SH3PXD2BA1X283 911 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 AQP7P3A6NL99 342 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 ENO4A6NNW6 628 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 M0R082 166 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 DLGAP1O14490 977 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 CDC42EP2O14613 210 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 KLF4O43474 513 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 DNPH1O43598 174 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 SS18L1O75177 396 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 ASAH2BP0C7U1 165 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 CDH2P19022 906 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 OMPP47874 163 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 CTBP2P56545 445 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 MED21Q13503 144 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 SLC17A1Q14916 467 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 SGCBQ16585 318 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 FREM1Q5H8C1 2179 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 FGD3Q5JSP0 725 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 FAM69AQ5T7M9 428 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF770Q6IQ21 691 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 TTC33Q6PID6 262 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 PAQR6Q6TCH4 344 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 RRM2BQ7LG56 351 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 NRMQ8IXM6 262 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 RNF113BQ8IZP6 322 aaKnown RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 KDM8Q8N371 416 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 OR6S1Q8NH40 331 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF417Q8TAU3 575 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 ACOT11Q8WXI4 607 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 TFAP2CQ92754 450 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 INTS12Q96CB8 462 aaKnown RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 STARD4Q96DR4 205 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 HS6ST2Q96MM7 605 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF587Q96SQ5 575 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 SLC19A3Q9BZV2 496 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 TMEFF2Q9UIK5 374 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 LRCH1Q9Y2L9 728 aa11.56□□□□□ -0.56
CCDC42-202ENST00000539522 DIDO1Q9BTC0 2240 aaKnown RBP11.56□□□□□ -0.56
CCDC42-202ENST00000539522 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
CCDC42-202ENST00000539522 IGKV3D-15A0A087WSY6 115 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 AHSA1O95433 338 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 SNAP29O95721 258 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 CH25HO95992 272 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 IGF2P01344 180 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 GASTP01350 101 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 HLA-DOBP13765 273 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 IGFBP5P24593 272 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 AGTR1P30556 359 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 SLC16A1P53985 500 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 CASP6P55212 293 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 FXYD6P3P58550 94 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-202ENST00000539522 SLC35A1P78382 337 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 PRKCDQ05655 676 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 TFF3Q07654 80 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 COX10Q12887 443 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 C6orf52Q5T4I8 152 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 ANKRD34AQ69YU3 496 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 MBOAT2Q6ZWT7 520 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 NUFIP2Q7Z417 695 aaKnown RBP11.55□□□□□ -0.56
CCDC42-202ENST00000539522 BTLAQ7Z6A9 289 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 ZER1Q7Z7L7 766 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms