RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ATXN7L2Q5T6C5 722 aaPredicted RBP11.45□□□□□ -0.58
USP3-203ENST00000538686 FAAP20Q6NZ36 180 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 UNQ6126/PRO20091Q6UXV3 157 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 MON1AQ86VX9 555 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 HIST3H2BBQ8N257 126 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 COMMD1Q8N668 190 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 TTC16Q8NEE8 873 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 OR13C3Q8NGS6 347 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 OR9A4Q8NGU2 314 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ISOC2Q96AB3 205 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 HAVCR1Q96D42 359 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 CDC6Q99741 560 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 HRH4Q9H3N8 390 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 GAL3ST2Q9H3Q3 398 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 EPHX3Q9H6B9 360 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 EGLN3Q9H6Z9 239 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ZFYVE1Q9HBF4 777 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 NRIP3Q9NQ35 241 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 MOKQ9UQ07 419 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ETV7Q9Y603 341 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 HHLA1C9JL84 531 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 H7C417 338 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 M0R036 132 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 NSA2O95478 260 aaKnown RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 FCGR3AP08637 254 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 AKAIN1P0CW23 69 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 CALCBP10092 127 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 NT5EP21589 574 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 CD1CP29017 333 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 CD200P41217 278 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 NKX6-1P78426 367 aaPredicted RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 SERINC3Q13530 473 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 TMEM35AQ53FP2 167 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 BEX5Q5H9J7 111 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 C9orf64Q5T6V5 341 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 DMKNQ6E0U4 476 aaPredicted RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 UBE3DQ7Z6J8 389 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 GJD3Q8N144 294 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 LRRC18Q8N456 261 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 SIRT6Q8N6T7 355 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ZNF283Q8N7M2 679 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 OR4C16Q8NGL9 310 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 SLC25A38Q96DW6 304 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 PGLYRP3Q96LB9 341 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 SLC25A21Q9BQT8 299 aaPredicted RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 TMEM208Q9BTX3 173 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 MTFP1Q9UDX5 166 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 HS3ST4Q9Y661 456 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 DVL1O14640 695 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 SEPT4O43236 478 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 HSPA12AO43301 675 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 GLCEO94923 617 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ARIH2O95376 493 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 FGBP02675 491 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 GBAP04062 536 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ALPPL2P10696 532 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 CD80P33681 288 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 GPR15P49685 360 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 SUCLG1P53597 346 aaKnown RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 MRPS11P82912 194 aaKnown RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 PCGF3Q3KNV8 242 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 KHDC3LQ587J8 217 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 MS4A13Q5J8X5 152 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 RABEPKQ7Z6M1 372 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 OR4K17Q8NGC6 315 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 OR10AD1Q8NGE0 317 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 OR51G2Q8NGK0 314 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 NUBPLQ8TB37 319 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ADAMTS17Q8TE56 1095 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 PPP1R1CQ8WVI7 109 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 TM4SF18Q96CE8 201 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ATG4CQ96DT6 458 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 PRRC1Q96M27 445 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 CWH43Q9H720 699 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 ARL15Q9NXU5 204 aa11.44□□□□□ -0.58
USP3-203ENST00000538686 MRPS18CQ9Y3D5 142 aaKnown RBP11.44□□□□□ -0.58
USP3-203ENST00000538686 ZNF724A8MTY0 619 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 EREGO14944 169 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 ITGB2P05107 769 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 CD1AP06126 327 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
USP3-203ENST00000538686 NME2P22392 152 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 DPP4P27487 766 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 CD34P28906 385 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 AKR1C3P42330 323 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 RPS10P46783 165 aaKnown RBP11.43□□□□□ -0.58
USP3-203ENST00000538686 RPIAP49247 311 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 CCR4P51679 360 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 CASP9P55211 416 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 PPP2CBP62714 309 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 PPP2CAP67775 309 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 PRKCZQ05513 592 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms