RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ZNF141Q15928 474 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SYPL1Q16563 259 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 ZSWIM7Q19AV6 140 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 KLHL26Q53HC5 615 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 EIPR1Q53HC9 387 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 NHSL2Q5HYW2 709 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 PDZK1Q5T2W1 519 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TYW3Q6IPR3 259 aaKnown RBP3.9□□□□□ -1.79
SNHG1-208ENST00000538266 HMBOX1Q6NT76 420 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 C8orf82Q6P1X6 216 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM81Q6P7N7 255 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM108Q6UXF1 575 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 Q6YL49 198 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 FRRS1Q6ZNA5 592 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 EIF3MQ7L2H7 374 aaKnown RBP3.9□□□□□ -1.79
SNHG1-208ENST00000538266 MARCH3Q86UD3 253 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 ARMC8Q8IUR7 673 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SLC15A3Q8IY34 581 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 FAM109AQ8N4B1 249 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 CBR4Q8N4T8 237 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 GATSQ8NAP1 163 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TOR1AIP2Q8NFQ8 470 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 OR4K17Q8NGC6 315 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 OR4C3Q8NH37 302 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 FAM110BQ8TC76 370 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 GRHL3Q8TE85 626 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 RASSF5Q8WWW0 418 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 PMM1Q92871 262 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 HGDQ93099 445 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TMIGD2Q96BF3 282 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 C12orf43Q96C57 262 aaKnown RBP3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SCMH1Q96GD3 660 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 CENPNQ96H22 339 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM19Q96HH6 336 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM41AQ96HV5 264 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 COG8Q96MW5 612 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SORCS2Q96PQ0 1159 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 NODALQ96S42 347 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 DOK1Q99704 481 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 CIB1Q99828 191 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TUBA1CQ9BQE3 449 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 ANGPTL4Q9BY76 406 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 HES7Q9BYE0 225 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TTTY12Q9BZ98 90 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 AMBRA1Q9C0C7 1298 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 PCDHAC1Q9H158 963 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SLC38A1Q9H2H9 487 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 EXO5Q9H790 373 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 PTGES2Q9H7Z7 377 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SH2D2AQ9NP31 389 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 OLAHQ9NV23 265 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 FLRT3Q9NZU0 649 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM181Q9P2C4 612 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 ABCD2Q9UBJ2 740 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SEC14L3Q9UDX4 400 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 CD300AQ9UGN4 299 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 DKKL1Q9UK85 242 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 SLC35A3Q9Y2D2 325 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 IFT52Q9Y366 437 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 CACNA1BQ00975 2339 aa3.9□□□□□ -1.79
SNHG1-208ENST00000538266 ANKRD11Q6UB99 2663 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-208ENST00000538266 A0A1W2PQD3 144 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 SERINC4A6NH21 518 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 LRRC3CA6NJW4 275 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 FAM166BA8MTA8 275 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 NPIPB9F8W1W9 429 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 BOLA2-SMG1P6H3BVE0 249 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 CXCR6O00574 342 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 ARPC2O15144 300 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF264O43296 627 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 FRS3O43559 492 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 FADS1O60427 444 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 CDC40O60508 579 aaKnown RBP eCLIP3.89□□□□□ -1.795e-11■□□□□ 11.3
SNHG1-208ENST00000538266 TRIM3O75382 744 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-208ENST00000538266 UGT2B17O75795 530 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 CBR3O75828 277 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 TRAPPC6AO75865 159 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 LDLRP01130 860 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 SLPIP03973 132 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 OCM2P0CE71 109 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 OCMP0CE72 109 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-208ENST00000538266 DPP4P27487 766 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 MAGEA5P43359 124 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 GSK3BP49841 420 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 ENTPD1P49961 510 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 CDH15P55291 814 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 PPIAP62937 165 aaKnown RBP3.89□□□□□ -1.79
SNHG1-208ENST00000538266 PMP22Q01453 160 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF117Q03924 483 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 MERTKQ12866 999 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 FOXI1Q12951 378 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 CBFBQ13951 182 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 VEZF1Q14119 521 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 FGFBP1Q14512 234 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 GANABQ14697 944 aaKnown RBP3.89□□□□□ -1.79
SNHG1-208ENST00000538266 CD226Q15762 336 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF829Q3KNS6 432 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-208ENST00000538266 SLC36A3Q495N2 470 aa3.89□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF311Q5JNZ3 666 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms