RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MAGEE2Q8TD90 523 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SLC35B4Q969S0 331 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 VRK1Q99986 396 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SHARPINQ9H0F6 387 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 MOV10Q9HCE1 1003 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 A0A096LPE4 126 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 A0A1W2PPZ6 126 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 VWC2LB2RUY7 222 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 B9A039 149 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NR5A2O00482 541 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PHF1O43189 567 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 LMX1BO60663 402 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ZNF43P17038 809 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 RPS5P46782 204 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SH3BGRP55822 239 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CLDN17P56750 224 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NAAAQ02083 359 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 GGTLC2Q14390 218 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 RGNQ15493 299 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C3orf36Q3SXR2 165 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 AGBL2Q5U5Z8 902 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 MIER2Q8N344 545 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 KDM8Q8N371 416 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 OR9I1Q8NGQ6 314 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 OR52B2Q96RD2 323 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PTDSS2Q9BVG9 487 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 RAD21L1Q9H4I0 556 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 BCL2L10Q9HD36 194 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 MYOZ1Q9NP98 299 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NKIRAS1Q9NYS0 192 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CRNNQ9UBG3 495 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 RPS6KB2Q9UBS0 482 aa17.12■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PDE5AO76074 875 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NUDT7P0C024 238 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 OR4A8P0C604 315 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CECR9P0C854 216 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 HOXB1P14653 301 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NR4A2P43354 598 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 TUBA1BP68363 451 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 TUBA4AP68366 448 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 HOXC5Q00444 222 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ROR2Q01974 943 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 EGR4Q05215 589 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CARTPTQ16568 116 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 TUBA1AQ71U36 451 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 MAVSQ7Z434 540 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 FAM169BQ8N8A8 192 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ANKK1Q8NFD2 765 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 BBS10Q8TAM1 723 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 MAL2Q969L2 176 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 A4GALTQ9NPC4 353 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ARGLU1Q9NWB6 273 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 RCE1Q9Y256 329 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PCDHB14Q9Y5E9 798 aa17.11■□□□□ 0.33
TNFRSF1B-204ENST00000536782 LOC390937A0A1W2PQ73 354 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C5orf58C9J3I9 102 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 RPL36A-HNRNPH2H7BZ11 118 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CLIC1O00299 241 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 IGLV1-44P01699 117 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 FADDQ13158 208 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 EFNB3Q15768 340 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ADIPOQQ15848 244 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 FAM166AQ6J272 317 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 VHLLQ6RSH7 139 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ANKS4BQ8N8V4 417 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 OR4F15Q8NGB8 312 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 GTF2H4Q92759 462 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 KTI12Q96EK9 354 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 FOXN4Q96NZ1 517 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 OXGR1Q96P68 337 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PAIP1Q9H074 479 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NELFAQ9H3P2 528 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C12orf10Q9HB07 376 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 KCNS2Q9ULS6 477 aa17.1■□□□□ 0.33
TNFRSF1B-204ENST00000536782 OR2T1O43869 369 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SLC43A1O75387 559 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ZNF432O94892 652 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 IGKV3-15P01624 115 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 BMP2P12643 396 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 APEHP13798 732 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CALCRP30988 508 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ARF1P84077 181 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C1DQ13901 141 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SLC2A7Q6PXP3 512 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C5orf46Q6UWT4 87 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C6orf89Q6UWU4 347 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 GPR137CQ8N3F9 429 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ARIH2OSQ8N7S6 290 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 NUP37Q8NFH4 326 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PRR14Q9BWN1 585 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PLK3Q9H4B4 646 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 B3GAT1Q9P2W7 334 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SEC14L4Q9UDX3 406 aa17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 FBXO9Q9UK97 447 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1B-204ENST00000536782 LOC100289279A0A1B0GTE1 492 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 VSTM5A8MXK1 200 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 AIM2O14862 343 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 FZD7O75084 574 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ETS2P15036 469 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CBR1P16152 277 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms