RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 H2AFZP0C0S5 128 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SMIM18P0DKX4 95 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CCL3P10147 92 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 JAK1P23458 1154 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 LOXP28300 417 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ATP5OP48047 213 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 RELAQ04206 551 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 KCNJ11Q14654 390 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SLC10A1Q14973 349 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 TMED2Q15363 201 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 HYAL4Q2M3T9 481 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SYT14P1Q58G82 188 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ODF2Q5BJF6 829 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CTSL3PQ5NE16 218 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 LRRC38Q5VT99 294 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 AFTPHQ6ULP2 937 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 H2AFVQ71UI9 128 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ABHD13Q7L211 337 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SLC26A11Q86WA9 606 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 LACC1Q8IV20 430 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CDK20Q8IZL9 346 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 KIRREL3Q8IZU9 778 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 FBXW8Q8N3Y1 598 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 OTUD6BQ8N6M0 293 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF614Q8N883 585 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF740Q8NDX6 193 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 B3GNT7Q8NFL0 401 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 MCOLN3Q8TDD5 553 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CCDC107Q8WV48 283 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SSMEM1Q8WWF3 244 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CTNNBL1Q8WYA6 563 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 NCLNQ969V3 563 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 NXNL1Q96CM4 212 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 TM4SF19Q96DZ7 209 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SPACA9Q96E40 222 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 RASL10BQ96S79 203 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ATOH8Q96SQ7 321 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SECISBP2Q96T21 854 aaKnown RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 FAM173AQ9BQD7 235 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SHARPINQ9H0F6 387 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 TSPYL1Q9H0U9 437 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 WNT5BQ9H1J7 359 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 CCDC68Q9H2F9 335 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 GOLPH3Q9H4A6 298 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 EXO5Q9H790 373 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 GALPQ9UBC7 116 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 YARS2Q9Y2Z4 477 aaKnown RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 ATG4BQ9Y4P1 393 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 SNX8Q9Y5X2 465 aa4.5□□□□□ -1.69
CLIP1-207ENST00000536634 BZW2Q9Y6E2 419 aaKnown RBP4.5□□□□□ -1.69
CLIP1-207ENST00000536634 YLPM1P49750 1951 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 KCNE1BA0A087WTH5 132 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 CTAGE15A4D2H0 777 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ERI2A8K979 691 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 C4orf51C9J302 202 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 H7C423 109 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 APOC4-APOC2K7ER74 178 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 GALR3O60755 368 aaPredicted RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 NIPSNAP2O75323 286 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 PSIP1O75475 530 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 EPPINO95925 133 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 APOC2P02655 101 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 DANCRP0C864 163 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 CNR1P21554 472 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 IL10P22301 178 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 MPZP25189 248 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 TRPC1P48995 793 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 HNRNPFP52597 415 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ADARP55265 1226 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 RPS15AP62244 130 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 PRPSAP1Q14558 356 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ARHGAP19Q14CB8 494 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 SNAPC1Q16533 368 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 CHRFAM7AQ494W8 412 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 DEFB134Q4QY38 66 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ANKRD20A4Q4UJ75 823 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ACSBG2Q5FVE4 666 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 PTRHD1Q6GMV3 140 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 RBM43Q6ZSC3 357 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 FAM47EQ6ZV65 393 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 OTOAQ7RTW8 1153 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 LUZP2Q86TE4 346 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ASPGQ86U10 573 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 CTAGE6Q86UF2 777 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF321PQ8N8H1 164 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 OR5AP2Q8NGF4 316 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 OR52K1Q8NGK4 314 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 OR4L1Q8NH43 312 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 OR52N5Q8NH56 324 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 NEIL3Q8TAT5 605 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ACTL9Q8TC94 416 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 KRT35Q92764 455 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 PIK3IP1Q96FE7 263 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 VMP1Q96GC9 406 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 FOPNLQ96NB1 174 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 ALS2CR12Q96Q35 445 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 URM1Q9BTM9 101 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 RBM24Q9BX46 236 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 TSSK1BQ9BXA7 367 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 MRPL1Q9BYD6 325 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms