RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 SLC2A10O95528 541 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 KLF8O95600 359 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 HMGN2P05204 90 aaKnown RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 THBS1P07996 1170 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ANKRD34CP0C6C1 535 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 AGTR1P30556 359 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 MPIP34949 423 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 AHRP35869 848 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 GPR1P46091 355 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 GDI2P50395 445 aaKnown RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 VASPP50552 380 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SCAND1P57086 179 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 B2MP61769 119 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 LSM11P83369 360 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 E2F1Q01094 437 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 LGALS3BPQ08380 585 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 TSC22D1Q15714 1073 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 NDUFAF6Q330K2 333 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ARSIQ5FYB1 569 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 CLVS2Q5SYC1 327 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 C9orf64Q5T6V5 341 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SHEQ5VZ18 495 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SFRP4Q6FHJ7 346 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 FAM180BQ6P0A1 224 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ARHGAP11AQ6P4F7 1023 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 UNQ9370/PRO34162Q6UXP9 181 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 Q6ZTK2 550 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 KRT77Q7Z794 578 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 MEX3DQ86XN8 651 aaKnown RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 VRK2Q86Y07 508 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SAMD14Q8IZD0 417 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ZNF454Q8N9F8 522 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 POMGNT2Q8NAT1 580 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 DNAAF1Q8NEP3 725 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 NUP43Q8NFH3 380 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 OR5M9Q8NGP3 310 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 OR4C6Q8NH72 309 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SNIP1Q8TAD8 396 aaKnown RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ADAMTS15Q8TE58 950 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 THEM6Q8WUY1 208 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 THAP4Q8WY91 577 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SMPDL3BQ92485 455 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 CNOT9Q92600 299 aaKnown RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 GHSRQ92847 366 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SMIM19Q96E16 107 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 MS4A3Q96HJ5 214 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 PGLYRP3Q96LB9 341 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 CXorf58Q96LI9 332 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 TEAD3Q99594 435 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 OR2AG1Q9H205 316 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 GAREM1Q9H706 876 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 MTHFD2LQ9H903 347 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 BEX1Q9HBH7 125 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 TM7SF3Q9NS93 570 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SIDT1Q9NXL6 827 aaKnown RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 TAS2R8Q9NYW2 309 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 C5AR2Q9P296 337 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ST6GALNAC2Q9UJ37 374 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 SLC7A7Q9UM01 511 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 CLEC4AQ9UMR7 237 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ZNF443Q9Y2A4 671 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 KLF2Q9Y5W3 355 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ETV7Q9Y603 341 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 WNT6Q9Y6F9 365 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 ZNF780BQ9Y6R6 833 aa7.15□□□□□ -1.26
CPSF7-216ENST00000536548 PLXNA2O75051 1894 aa7.15□□□□□ -1.27
CPSF7-216ENST00000536548 TBC1D3EA0A087X179 549 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TBC1D3KA0A087X1G2 549 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 A0A0D9SG52 128 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TCRBV21S2A2A0A5A6 115 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TBC1D3BA6NDS4 549 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TBC1D3FA6NER0 549 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 FAM183AA6NL82 134 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 LEFTY2O00292 366 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 DVL2O14641 736 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TERTO14746 1132 aaKnown RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 OR1F1O43749 312 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 FMO6PO60774 539 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 PRAMEF2O60811 474 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 ERAL1O75616 437 aaKnown RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TBX6O95947 436 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 LPLP06858 475 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 OR2T7P0C7T2 308 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 SLC6A6P31641 620 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 PYCR1P32322 319 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TRHRP34981 398 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 ACVR1BP36896 505 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 RAD52P43351 418 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 TSFMP43897 325 aaKnown RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 CBX5P45973 191 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 HOXA1P49639 335 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-216ENST00000536548 SLC16A1P53985 500 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 ZNF85Q03923 595 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 STX4Q12846 297 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 IL10RAQ13651 578 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 CDK5R1Q15078 307 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 C6orf132Q5T0Z8 1188 aa7.14□□□□□ -1.27
CPSF7-216ENST00000536548 FAM27D1Q5T7N8 215 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms