RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
UBE3B-206ENST00000536398 MRGBPQ9NV56 204 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 GID8Q9NWU2 228 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 CMTM6Q9NX76 183 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 CADP27708 2225 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 AIM2O14862 343 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 SLC22A2O15244 555 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 OR2T1O43869 369 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 FMO6PO60774 539 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 SHOX2O60902 331 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-206ENST00000536398 SMPD2O60906 423 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 HLA-DOBP13765 273 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 CD99P14209 185 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF43P17038 809 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 GTF2E2P29084 291 aaKnown RBP12.52□□□□□ -0.41
UBE3B-206ENST00000536398 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF613Q6PF04 617 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 H1FNTQ75WM6 255 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-206ENST00000536398 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 P2RY8Q86VZ1 359 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 CARM1Q86X55 608 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 POMGNT2Q8NAT1 580 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 RP9Q8TA86 221 aaKnown RBP12.52□□□□□ -0.41
UBE3B-206ENST00000536398 ADAMTS16Q8TE57 1224 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 PIGTQ969N2 578 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 PERPQ96FX8 193 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 OXGR1Q96P68 337 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 PIP5K1AQ99755 562 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 FAM107BQ9H098 131 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 EVA1AQ9H8M9 152 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 NGBQ9NPG2 151 aa12.52□□□□□ -0.41
UBE3B-206ENST00000536398 DSCAMO60469 2012 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SHISA9B4DS77 424 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 CCDC22O60826 627 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF432O94892 652 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SOD3P08294 240 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 DRD4P21917 467 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 MPGP29372 298 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 IL1RL1Q01638 556 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SPOCK1Q08629 439 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 VEZF1Q14119 521 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF672Q499Z4 452 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-206ENST00000536398 C5orf46Q6UWT4 87 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 NHLRC1Q6VVB1 395 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SLC15A3Q8IY34 581 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SLC41A3Q96GZ6 507 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 ALKBH3Q96Q83 286 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-206ENST00000536398 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SLC17A5Q9NRA2 495 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SLC7A7Q9UM01 511 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 LAMP3Q9UQV4 416 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 B3GALT5Q9Y2C3 310 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 SH3GLB1Q9Y371 365 aa12.51□□□□□ -0.41
UBE3B-206ENST00000536398 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 M0R1B8 84 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 KPNA4O00629 521 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 ABCD4O14678 606 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 TRAF3IP2O43734 574 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 CHP2O43745 196 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 KRT33AO76009 404 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 NQO1P15559 274 aaKnown RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 OR1E2P47887 323 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 C1DQ13901 141 aaKnown RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 LRRC23Q53EV4 343 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 CYBRD1Q53TN4 286 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 Q5PR19 223 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 PHYHD1Q5SRE7 291 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 OR7E24Q6IFN5 339 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 ERICH5Q6P6B1 374 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 MICU2Q8IYU8 434 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 LRRC17Q8N6Y2 441 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF837Q96EG3 531 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-206ENST00000536398 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 EPYCQ99645 322 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 PRSS27Q9BQR3 290 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 PCDHAC1Q9H158 963 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 MYLK2Q9H1R3 596 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 DLL4Q9NR61 685 aa12.5□□□□□ -0.41
UBE3B-206ENST00000536398 A0A096LPE4 126 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 LOC102725191A0A1B0GVB3 256 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 A0A1W2PPZ6 126 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 TRAPPC13A5PLN9 417 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 ZNF587BE7ETH6 402 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 PLPP3O14495 311 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 CH25HO95992 272 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 DANCRP0C864 163 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 FUT4P22083 530 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 CD40P25942 277 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 LSP1P33241 339 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 KDELR2P33947 212 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 PTH2RP49190 550 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 LIPEQ05469 1076 aa12.49□□□□□ -0.41
UBE3B-206ENST00000536398 PMS2P3Q13401 168 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms