RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 C12orf10Q9HB07 376 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 CBLN4Q9NTU7 201 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 SELENONQ9NZV5 590 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 TESQ9UGI8 421 aaKnown RBP12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 TRIM33Q9UPN9 1127 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ANGPT4Q9Y264 503 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 NDUFAF1Q9Y375 327 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 GMEB1Q9Y692 573 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 TRAV36DV7A0A075B6V5 113 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A096LPE4 126 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A0G2JND7 137 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A1W2PPZ6 126 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 ATP6V1G2-DDX39BF2Z307 99 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 AIM2O14862 343 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 OR2T1O43869 369 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 OPN1SWP03999 348 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 GRPRP30550 384 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 NUDT6P53370 316 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 TUBA1BP68363 451 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 TUBA4AP68366 448 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 PPP2R2BQ00005 443 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 ROR2Q01974 943 aaKnown RBP12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 DMTNQ08495 405 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 SELPLGQ14242 412 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 OR1Q1Q15612 314 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 TBRG1Q3YBR2 411 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 FAM69AQ5T7M9 428 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 C11orf71Q6IPW1 123 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 HMBOX1Q6NT76 420 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 TUBA1AQ71U36 451 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 RETREG3Q86VR2 466 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 PTOV1Q86YD1 416 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC47A1Q96FL8 570 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 ADAD1Q96M93 576 aaKnown RBP12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 OXGR1Q96P68 337 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF385DQ9H6B1 395 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 TMEM27Q9HBJ8 222 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 MOKQ9UQ07 419 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 NAV3Q8IVL0 2385 aa12.49□□□□□ -0.41
RTN3P1-201ENST00000536295 FN1P02751 2386 aaKnown RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 OR6C65A6NJZ3 312 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 M0R3H8 397 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 EDF1O60869 148 aaKnown RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 MFN2O95140 757 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 NQO1P15559 274 aaKnown RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 UBE2NP61088 152 aaKnown RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 NFYCQ13952 458 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 NRF1Q16656 503 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 FAM91A1Q658Y4 838 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 C5orf46Q6UWT4 87 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 H1FNTQ75WM6 255 aaPredicted RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 RANBP3LQ86VV4 465 aaPredicted RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 C10orf53Q8N6V4 93 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 C11orf65Q8NCR3 313 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 ANKRD27Q96NW4 1050 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 CGREF1Q99674 301 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 LINC00470Q9BZP3 86 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 KLHL14Q9P2G3 628 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 B3GAT1Q9P2W7 334 aa12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 NSD1Q96L73 2696 aaPredicted RBP12.48□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 IGHV1-18A0A0C4DH31 117 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A1B0GX12 115 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 TPST2O60704 377 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC43A1O75387 559 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 SASH3O75995 380 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 CDH12P55289 794 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 RAB35Q15286 201 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 CARD17Q5XLA6 110 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF544Q6NX49 715 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 NET1Q7Z628 596 aaPredicted RBP12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 GPR137CQ8N3F9 429 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 DPP10Q8N608 796 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 BHLHE22Q8NFJ8 381 aaPredicted RBP12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC38A2Q96QD8 506 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 OBP2BQ9NPH6 170 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 RCE1Q9Y256 329 aa12.47□□□□□ -0.41
RTN3P1-201ENST00000536295 ZANQ9Y493 2812 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A087WUJ7 227 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 M0QX08 132 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF432O94892 652 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 HPRP00739 348 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 APOBEC3AP31941 199 aaPredicted RBP12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 PCBP3P57721 371 aaKnown RBP12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 ARF1P84077 181 aaKnown RBP12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 KRTAP1-1Q07627 177 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 RBBP4Q09028 425 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 DUSP7Q16829 419 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms