RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SIRT4Q9Y6E7 314 aaPredicted RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 COLEC10Q9Y6Z7 277 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 UBE2QL1A1L167 161 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 C1orf196B1AJZ1 125 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 SMAD9O15198 467 aaKnown RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 ADCYAP1P18509 176 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 MMP11P24347 488 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 AHRP35869 848 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 EEF1A1P68104 462 aaKnown RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 EEF1A1P5Q5VTE0 462 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 BEND4Q6ZU67 534 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 FAM122BQ7Z309 247 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 MS4A6EQ96DS6 147 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 RHOVQ96L33 236 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 SCN2AQ99250 2005 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 A0A1W2PR48 441 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 IRGMA1A4Y4 181 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 GP1BAP07359 652 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 NOS3P29474 1203 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 CMPK1P30085 196 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 P2RY4P51582 365 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 PCBP4P57723 403 aaKnown RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 SNRPNP63162 240 aaKnown RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 BTN3A2P78410 334 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 DHRS7BQ6IAN0 325 aaPredicted RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 PODNL1Q6PEZ8 512 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 SMARCD3Q6STE5 483 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 FAM71CQ8NEG0 241 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 CA5BP1Q8WTZ4 195 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 COL26A1Q96A83 441 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 NEURL3Q96EH8 262 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 ZNF75AQ96N20 296 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 WFDC6Q9BQY6 131 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 PINK1Q9BXM7 581 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 TLNRD1Q9H1K6 362 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 ACSS1Q9NUB1 689 aaPredicted RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 ASB6Q9NWX5 421 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 RASL12Q9NYN1 266 aa12.85□□□□□ -0.35
LIG1-203ENST00000536218 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.85□□□□□ -0.35
LIG1-203ENST00000536218 A0A0A6YYD5 115 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 HMSDA8MTL9 139 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 C2orf74A8MZ97 194 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 F5H5P2 479 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 HIST1H1TP22492 207 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 TEAD1P28347 426 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 DLX5P56178 289 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 LASP1Q14847 261 aaKnown RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 TMEM71Q6P5X7 295 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 OR4K5Q8NGD3 323 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 WDR92Q96MX6 357 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 GPA33Q99795 319 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 RAB11FIP5Q9BXF6 653 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 OR51I1Q9H343 314 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 APOBEC3BQ9UH17 382 aaKnown RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 IL20RAQ9UHF4 553 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 MDC1Q14676 2089 aaKnown RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 ZNF729A6NN14 1252 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 HMGN4O00479 90 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 AQP8O94778 261 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 OR2A4O95047 310 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 FARS2O95363 451 aaKnown RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 NR2F1P10589 423 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 PTHLHP12272 177 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 BDKRB2P30411 391 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 DUSP2Q05923 314 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 LINC00303Q3SY05 128 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 PRRT3Q5FWE3 981 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 DCAF12L2Q5VW00 463 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 ABHD17CQ6PCB6 329 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 ZNF761Q86XN6 746 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 OR6V1Q8N148 313 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 OR51G2Q8NGK0 314 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 TNFAIP8L1Q8WVP5 186 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 OR2A7Q96R45 310 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 RSPO3Q9BXY4 272 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 NEUROD4Q9HD90 331 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 KLK11Q9UBX7 282 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 ZNF629Q9UEG4 869 aaPredicted RBP12.84□□□□□ -0.35
LIG1-203ENST00000536218 PCDHGA5Q9Y5G8 931 aa12.84□□□□□ -0.35
LIG1-203ENST00000536218 PCBP3P57721 371 aaKnown RBP12.83□□□□□ -0.35
LIG1-203ENST00000536218 ECH1Q13011 328 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 DYRK1AQ13627 763 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 ATXN7L3Q14CW9 347 aaPredicted RBP12.83□□□□□ -0.35
LIG1-203ENST00000536218 CDC73Q6P1J9 531 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 LSRQ86X29 649 aaPredicted RBP12.83□□□□□ -0.35
LIG1-203ENST00000536218 ZNF485Q8NCK3 441 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms