RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CDHR4A6H8M9 788 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ITM2AO43736 263 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 UPK3AO75631 287 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ANP32DO95626 131 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 IGKV3-15P01624 115 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 IGLV1-44P01699 117 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 BCHEP06276 602 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GSNP06396 782 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ADRA2AP08913 450 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 TFPTP0C1Z6 253 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CBR1P16152 277 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 THBS4P35443 961 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CRATP43155 626 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CDH15P55291 814 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 VRK2Q86Y07 508 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZNF786Q8N393 782 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 PIK3C3Q8NEB9 887 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 IL17RDQ8NFM7 739 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 STK35Q8TDR2 534 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 TPK1Q9H3S4 243 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 USP22Q9UPT9 525 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZNF443Q9Y2A4 671 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CMAHPQ9Y471 501 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SPEF1Q9Y4P9 236 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 NOX1Q9Y5S8 564 aa11.24□□□□□ -0.61
TNFRSF1A-207ENST00000535958 IGHV2OR16-5A0A0B4J2B6 119 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 B4DSR2 109 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 RFXANKO14593 260 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CELA3BP08861 270 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 PNMTP11086 282 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 IL2RGP31785 369 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 LSP1P33241 339 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SLC1A6P48664 564 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 DVL1P1P54792 670 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ARF1P84077 181 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 RNF220Q5VTB9 566 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 REP15Q6BDI9 236 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 KRT80Q6KB66 452 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 LSRQ86X29 649 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 EPHX4Q8IUS5 362 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CCDC36Q8IYA8 594 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CDK20Q8IZL9 346 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 MFSD8Q8NHS3 518 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 MGARPQ8TDB4 240 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 C1orf159Q96HA4 380 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 METTL17Q9H7H0 456 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SEC61A2Q9H9S3 476 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GRIP1Q9Y3R0 1128 aa11.23□□□□□ -0.61
TNFRSF1A-207ENST00000535958 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SLCO1B7G3V0H7 640 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 M0R233 179 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 AIM2O14862 343 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 BIRC5O15392 142 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 TYROBPO43914 113 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 LILRA1O75019 489 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CDKN2CP42773 168 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ETV4P43268 484 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GPR6P46095 362 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 RPS5P46782 204 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 P2RY4P51582 365 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 DSTNP60981 165 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 UFM1P61960 85 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 RPS23P62266 143 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GALK2Q01415 458 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 HGFACQ04756 655 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 TRIP10Q15642 601 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CEACAM16Q2WEN9 425 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 COX20Q5RI15 118 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 LINGO2Q7L985 606 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 MDP1Q86V88 176 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 KDM8Q8N371 416 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GLB1L3Q8NCI6 653 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZNF418Q8TF45 676 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZMYND19Q96E35 227 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 DOK1Q99704 481 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 NELFAQ9H3P2 528 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 NOX3Q9HBY0 568 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 B3GAT2Q9NPZ5 323 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 THUMPD1Q9NXG2 353 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 IFT52Q9Y366 437 aa11.22□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZNF99A8MXY4 864 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 RPL36A-HNRNPH2H7BZ11 118 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SYNGR3O43761 229 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 OR2T1O43869 369 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SEC14L2O76054 403 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SAGP10523 405 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CD79AP11912 226 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ETFAP13804 333 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 NQO1P15559 274 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 CREB1P16220 341 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ACAA2P42765 397 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 KRT71Q3SY84 523 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms