RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ARMC8Q8IUR7 673 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 HIPK4Q8NE63 616 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 SLC47A1Q96FL8 570 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 OXGR1Q96P68 337 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 KCNS3Q9BQ31 491 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 PRR14Q9BWN1 585 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 CACNG6Q9BXT2 260 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 IKZF5Q9H5V7 419 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 VIPAS39Q9H9C1 493 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 OBP2BQ9NPH6 170 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 ANGPT4Q9Y264 503 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 FN1P02751 2386 aaKnown RBP13.51□□□□□ -0.25
CPSF1-211ENST00000533492 TRAV36DV7A0A075B6V5 113 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 BMP4P12644 408 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 CBLP22681 906 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 PAX7P23759 505 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 HTR2AP28223 471 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 NUDT6P53370 316 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 LGALS3BPQ08380 585 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 RAB35Q15286 201 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 TBRG1Q3YBR2 411 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 FAM91A1Q658Y4 838 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-211ENST00000533492 DHDDSQ86SQ9 333 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 C11orf65Q8NCR3 313 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 OR1K1Q8NGR3 316 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 STON2Q8WXE9 905 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 TAAR8Q969N4 342 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 ALKBH3Q96Q83 286 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-211ENST00000533492 EPYCQ99645 322 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 CPPED1Q9BRF8 314 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-211ENST00000533492 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 RSPO3Q9BXY4 272 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-211ENST00000533492 LINC00470Q9BZP3 86 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 TESQ9UGI8 421 aaKnown RBP13.51□□□□□ -0.25
CPSF1-211ENST00000533492 ZANQ9Y493 2812 aa13.51□□□□□ -0.25
CPSF1-211ENST00000533492 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 M0R082 166 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 AKAP8O43823 692 aaKnown RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 SLC43A1O75387 559 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 UPK3AO75631 287 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 TP53P04637 393 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 NQO1P15559 274 aaKnown RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 GRPRP30550 384 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 APOBEC3AP31941 199 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 CHRNB3Q05901 458 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 MFSD13AQ14CX5 517 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 OR1Q1Q15612 314 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 ADRM1Q16186 407 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 CYP51A1Q16850 503 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 B3GLCTQ6Y288 498 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 COMTD1Q86VU5 262 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 RANBP3LQ86VV4 465 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 GPR137CQ8N3F9 429 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF417Q8TAU3 575 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 BOD1Q96IK1 185 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 ANKRD27Q96NW4 1050 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF587Q96SQ5 575 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-211ENST00000533492 CGREF1Q99674 301 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 EVA1AQ9H8M9 152 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 NPHS2Q9NP85 383 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 SEC14L4Q9UDX3 406 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 MOKQ9UQ07 419 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 RCE1Q9Y256 329 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 PMF1-BGLAPU3KQ54 211 aa13.5□□□□□ -0.25
CPSF1-211ENST00000533492 A0A087WUJ7 227 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 A0A096LPE4 126 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 A0A0G2JND7 137 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 A0A1W2PPZ6 126 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 ATP6V1G2-DDX39BF2Z307 99 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
CPSF1-211ENST00000533492 MFN2O95140 757 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 SH3BGRP55822 239 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-211ENST00000533492 DMTNQ08495 405 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 RBBP4Q09028 425 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 NFYCQ13952 458 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 C11orf71Q6IPW1 123 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 ANKRD16Q6P6B7 361 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 DPP10Q8N608 796 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 C10orf53Q8N6V4 93 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 SMYD1Q8NB12 490 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 TSPEARQ8WU66 669 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 BCL2L2Q92843 193 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-211ENST00000533492 SIKE1Q9BRV8 207 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 CORINQ9Y5Q5 1042 aa13.49□□□□□ -0.25
CPSF1-211ENST00000533492 IGKV1D-42A0A075B6H8 117 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 A0A1B0GX12 115 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 M0QX08 132 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF432O94892 652 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 CRYAAP02489 173 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 HOXB1P14653 301 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-211ENST00000533492 MTPNP58546 118 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 DSCR9P59020 149 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 METTL21CQ5VZV1 264 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms