RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 IFT52Q9Y366 437 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 A0A0G2JPF8 293 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 HNRNPCL2B2RXH8 293 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 HNRNPCL3B7ZW38 293 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 FRS3O43559 492 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 LMX1BO60663 402 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 HNRNPCL1O60812 293 aaKnown RBP8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 TFPTP0C1Z6 253 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 HNRNPCL4P0DMR1 293 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 APEHP13798 732 aaKnown RBP8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 ETFAP13804 333 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF43P17038 809 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 SERPINF1P36955 418 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 SH3BGRP55822 239 aaPredicted RBP8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 STX1BP61266 288 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 NCALDP61601 193 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC25A3Q00325 362 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 BNIP2Q12982 314 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 C1DQ13901 141 aaKnown RBP8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 PDCD4Q53EL6 469 aaKnown RBP8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF311Q5JNZ3 666 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 VHLLQ6RSH7 139 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF540Q8NDQ6 660 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 OR1K1Q8NGR3 316 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 MGARPQ8TDB4 240 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 KATNB1Q9BVA0 655 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 PARD6BQ9BYG5 372 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 RAB1BQ9H0U4 201 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 CHODLQ9H9P2 273 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 TPT1P8Q9HAU6 139 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 CA10Q9NS85 328 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 SELENONQ9NZV5 590 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 GPR45Q9Y5Y3 372 aa8.41□□□□□ -1.06
PPFIA1-223ENST00000532793 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 LOC390937A0A1W2PQ73 354 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 TMEM120BA0PK00 339 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 B9A039 149 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 UBDO15205 165 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 PHF1O43189 567 aaPredicted RBP8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 OR2T1O43869 369 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC43A1O75387 559 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 PDE5AO76074 875 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 LGI1O95970 557 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 ZCCHC18P0CG32 403 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SRD5A1P18405 259 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 IL12AP29459 219 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 RPS5P46782 204 aaKnown RBP8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 CAPZA2P47755 286 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SELENOPP49908 381 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 POLR2JP52435 117 aaKnown RBP8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 CLDN17P56750 224 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 PLAURQ03405 335 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 RPS26P11Q5JNZ5 115 aaPredicted RBP8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 ANKRD16Q6P6B7 361 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 C5orf46Q6UWT4 87 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 MSANTD1Q6ZTZ1 278 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 CREB3L2Q70SY1 520 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 GPR137CQ8N3F9 429 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 MFSD8Q8NHS3 518 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 BBS10Q8TAM1 723 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 STK35Q8TDR2 534 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC38A5Q8WUX1 472 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC38A4Q969I6 547 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 TMEM19Q96HH6 336 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SPATA9Q9BWV2 254 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 DYNLRB1Q9NP97 96 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 ZIM2Q9NZV7 527 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC13A4Q9UKG4 626 aa8.4□□□□□ -1.06
PPFIA1-223ENST00000532793 ARFGEF3Q5TH69 2177 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 TLN2Q9Y4G6 2542 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 PLCE1Q9P212 2302 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 A0A096LPE4 126 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 ARPC4-TTLL3A0A0A6YYG9 625 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 IGHV1-18A0A0C4DH31 117 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 AIM2O14862 343 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 ZNF500O60304 480 aaPredicted RBP8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 LY6HO94772 140 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 C1QCP02747 245 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 PNMTP11086 282 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 NQO1P15559 274 aaKnown RBP8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 ACAA2P42765 397 aaKnown RBP8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 MAP2K3P46734 347 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 ROR2Q01974 943 aaKnown RBP8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 NAAAQ02083 359 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 NPRL3Q12980 569 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 FADDQ13158 208 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 SERPINA11Q86U17 422 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 KRT73Q86Y46 540 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 PHC2Q8IXK0 858 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 MIER2Q8N344 545 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 PIK3C3Q8NEB9 887 aa8.39□□□□□ -1.07
PPFIA1-223ENST00000532793 MAGEE2Q8TD90 523 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms