RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 A8MVM7 634 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 RFXANKO14593 260 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 PHF1O43189 567 aaPredicted RBP11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 LY6HO94772 140 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 CSF3P09919 207 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 USF1P22415 310 aaPredicted RBP11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 MVDP53602 400 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 BNIP1Q12981 228 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 BNIP2Q12982 314 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 SWI5Q1ZZU3 235 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 LIN52Q52LA3 116 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 COQ5Q5HYK3 327 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 TMEM225Q6GV28 225 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 BLOC1S3Q6QNY0 202 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF836Q6ZNA1 936 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 MSANTD1Q6ZTZ1 278 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 ABHD12BQ7Z5M8 362 aaPredicted RBP11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 CADM2Q8N3J6 435 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 POU5F2Q8N7G0 328 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 PCYOX1LQ8NBM8 494 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 FBXO17Q96EF6 278 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 BEX2Q9BXY8 128 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 RMND5AQ9H871 391 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 OBP2BQ9NPH6 170 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 ARL8BQ9NVJ2 186 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 TMEM160Q9NX00 188 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 ADPRHL2Q9NX46 363 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 LEF1Q9UJU2 399 aaPredicted RBP11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 NDUFAF1Q9Y375 327 aa11.18□□□□□ -0.62
TM9SF1-211ENST00000531406 NUP214P35658 2090 aaPredicted RBP11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 IGHV1-18A0A0C4DH31 117 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 KRT33AO76009 404 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 KRT34O76011 436 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 VAMP5O95183 116 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 LGI1O95970 557 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 TFPTP0C1Z6 253 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 PRG2P13727 222 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 ETFAP13804 333 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 P2RY4P51582 365 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 COPZ1P61923 177 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 LGALS3BPQ08380 585 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 ZSWIM7Q19AV6 140 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 TBRG1Q3YBR2 411 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 C1orf140Q5VVS0 124 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 REP15Q6BDI9 236 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 WBP2NLQ6ICG8 309 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 CREB3L2Q70SY1 520 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 GPAT4Q86UL3 456 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 FUNDC1Q8IVP5 155 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 CLIP4Q8N3C7 705 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 SLC38A2Q96QD8 506 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 TAPBPLQ9BX59 468 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 CALML5Q9NZT1 146 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 P2RX2Q9UBL9 471 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF443Q9Y2A4 671 aaPredicted RBP11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 CR1P17927 2039 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 CHD3Q12873 2000 aaKnown RBP11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 ABCA1O95477 2261 aa11.17□□□□□ -0.62
TM9SF1-211ENST00000531406 VWC2LB2RUY7 222 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 MRASO14807 208 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 NPIPB7O75200 414 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 BCHEP06276 602 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 ZCCHC18P0CG32 403 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 SERPINF1P36955 418 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 CRATP43155 626 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 SELENOPP49908 381 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 PDLIM4P50479 330 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 NUDT2P50583 147 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 LSM11P83369 360 aaKnown RBP eCLIP11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 LARS2Q15031 903 aaKnown RBP11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 DNAL1Q4LDG9 190 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 RPS26P11Q5JNZ5 115 aaPredicted RBP11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 RNF220Q5VTB9 566 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 C16orf89Q6UX73 402 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 EPHX4Q8IUS5 362 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 OR1K1Q8NGR3 316 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 SLC38A5Q8WUX1 472 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 BCL2L2Q92843 193 aaPredicted RBP11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 RCN3Q96D15 328 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 LPAR3Q9UBY5 353 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 RASD1Q9Y272 281 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 CHST2Q9Y4C5 530 aa11.16□□□□□ -0.62
TM9SF1-211ENST00000531406 ARPC4-TTLL3A0A0A6YYG9 625 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 A0A0G2JPF8 293 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 OR6C65A6NJZ3 312 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 TMEM229AB2RXF0 380 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 HNRNPCL2B2RXH8 293 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 HNRNPCL3B7ZW38 293 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 NDUFS8O00217 210 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 AIM2O14862 343 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 FRS3O43559 492 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 LMX1BO60663 402 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 UPK3AO75631 287 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms