RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 TRPM3Q9HCF6 1732 aaPredicted RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 MARF1Q9Y4F3 1742 aaKnown RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 NKX2-6A6NCS4 301 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 TMX2-CTNND1H3BSU7 103 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 UGT1A9O60656 530 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 ADCY5O95622 1261 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 SLC25A27O95847 323 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 KRT13P13646 458 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 RCC1P18754 421 aaPredicted RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 CALCRP30988 508 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 RFC4P35249 363 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 TDO2P48775 406 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 PPOXP50336 477 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 KPNA2P52292 529 aaKnown RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 PKNOX1P55347 436 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 HERVK_113P61574 105 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 MESDQ14696 234 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 KLF17Q5JT82 389 aaPredicted RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 C1orf100Q5SVJ3 147 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 RIPPLY2Q5TAB7 128 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 KHDRBS2Q5VWX1 349 aaKnown RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 C11orf71Q6IPW1 123 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 C6orf89Q6UWU4 347 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 CCDC50Q8IVM0 306 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 SLC38A6Q8IZM9 456 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 MDS2Q8NDY4 140 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 OR4D9Q8NGE8 314 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 FGF11Q92914 225 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 TBX15Q96SF7 602 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 OMDQ99983 421 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 TUBGCP2Q9BSJ2 902 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 FOLH1BQ9HBA9 442 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 PATZ1Q9HBE1 687 aaKnown RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 PALMDQ9NP74 551 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 CYTL1Q9NRR1 136 aa3.37□□□□□ -1.87
CHEK1-211ENST00000531062 AK6Q9Y3D8 172 aaKnown RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 POLR3AO14802 1390 aaPredicted RBP3.37□□□□□ -1.87
CHEK1-211ENST00000531062 CRB1P82279 1406 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 CPSF1Q10570 1443 aaKnown RBP3.36□□□□□ -1.87
CHEK1-211ENST00000531062 ARHGEF28Q8N1W1 1705 aaKnown RBP3.36□□□□□ -1.87
CHEK1-211ENST00000531062 FAM189A1O60320 539 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 ICAM2P13598 275 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 CHI3L1P36222 383 aaPredicted RBP3.36□□□□□ -1.87
CHEK1-211ENST00000531062 BPIFB3P59826 476 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 CNTN2Q02246 1040 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 SLC25A52Q3SY17 297 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 SLC36A3Q495N2 470 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 BOLA3Q53S33 107 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 Q6ZN92 141 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 OR51G1Q8NGK1 321 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 CCNL2Q96S94 520 aaPredicted RBP3.36□□□□□ -1.87
CHEK1-211ENST00000531062 P2RY13Q9BPV8 354 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 VCXQ9H320 206 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 RPH3ALQ9UNE2 315 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 PHRF1Q9P1Y6 1649 aaKnown RBP3.36□□□□□ -1.87
CHEK1-211ENST00000531062 ALS2Q96Q42 1657 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 THSD7AQ9UPZ6 1657 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 CPDO75976 1380 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 NWD2Q9ULI1 1742 aa3.36□□□□□ -1.87
CHEK1-211ENST00000531062 EP400Q96L91 3159 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 IGHV1OR21-1A0A087WYE8 117 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 RSPH10B2B2RC85 870 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 DCTN6O00399 190 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 HCRTR1O43613 425 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 TNFSF13O75888 250 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 KLK3P07288 261 aaPredicted RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 RSPH10BP0C881 870 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 PNMA6AP0CW24 399 aaPredicted RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 CCDC130P13994 396 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 POU2F1P14859 743 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 RPS2P15880 293 aaKnown RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 CXCR2P25025 360 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 TNNT2P45379 298 aaPredicted RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 SUCLG1P53597 346 aaKnown RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 SELPLGQ14242 412 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 GGTLC2Q14390 218 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 HSDL2Q6YN16 418 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 SLC35F2Q8IXU6 374 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 OR6C4Q8NGE1 309 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 OR6X1Q8NH79 312 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 OR9G1Q8NH87 305 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 FAM3CQ92520 227 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 OSTF1Q92882 214 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 FAM210BQ96KR6 192 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 OR2M2Q96R28 347 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 NIPSNAP3BQ9BS92 247 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 RIBC2Q9H4K1 309 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 SUDS3Q9H7L9 328 aaPredicted RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 POPDC2Q9HBU9 364 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 SIGLEC8Q9NYZ4 499 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 IL36GQ9NZH8 169 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 STAP1Q9ULZ2 295 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
CHEK1-211ENST00000531062 QRICH2Q9H0J4 1663 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 ASTN1O14525 1302 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 KIF16BQ96L93 1317 aa3.35□□□□□ -1.87
CHEK1-211ENST00000531062 RGPD1P0DJD0 1748 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms